Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq7 203 1e-46 seq23 149 2e-30 seq24 141 3e-28 seq14 91.5 4e-13 >seq7 Length=6264467 Score = 203 bits (224), Expect = 1e-46 Identities = 592/906 (65%), Gaps = 13/906 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || |||||||| || || || || || ||||| | ||| | | |||| | Sbjct 3896195 CCGCTGTTGGTATCGATTTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGATGACC 3896136 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| || || || || || |||||| | || || || || | ||| || || | Sbjct 3896135 GCATTGAAATCATCGCCAACGACCAGGGTAACCGCACTACCCCCTCTTTCGTGGCTTTCA 3896076 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || || | || || || | | Sbjct 3896075 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCTCACA 3896016 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || ||||||||||| || || ||| | ||||| | ||| | || Sbjct 3896015 ACACCGTCTTCGATGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGACGCTGAGGTC---- 3895960 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || ||||| | || || | || || | ||||| | | ||| |||| || || || Sbjct 3895959 CAGTCTGACATGAAGCACTGGCCCTTCAAGGTTGT-CGAGAAG--GGTGGCAAGCCCATC 3895903 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 | |||||||| | || || || || || || ||||| || | || || ||| Sbjct 3895902 GTCGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAGGTCTCCTCCATG 3895843 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 | | || ||| || | ||||| || || | |||| || || | | ||| Sbjct 3895842 ATCCTCACCAAGATGCGTGAGACCGCTGAGGCCTACCTCGGTGGCACCGTCAACAACGCT 3895783 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || ||||| || ||||| || || || | |||||| || || || |||||||| Sbjct 3895782 GTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGT 3895723 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || ||||| | || || || || ||||| ||||| || ||||| Sbjct 3895722 CTCATTGCCGGCCTGAACGTTCTCCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCC 3895663 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | | || || || | || || || ||| | |||||| Sbjct 3895662 TACGGTCTGGACAAGAAGGCCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTTGGTGGT 3895603 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || ||||| || || || || | || ||||| || || || || || || || Sbjct 3895602 GGTACCTTCGATGTCTCCCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACC 3895543 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 |||||||| || || | ||||| || || || || || || ||||| || || || Sbjct 3895542 GCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTCGTCAACCACTTCGTC 3895483 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 || || || ||||| ||||| || | || | || || | || | ||||| Sbjct 3895482 AACGAGTTCAAGCG-CAAGCACAAGAAGGACCTCACCTCCAACGCTCGTGCTCTCCGTCG 3895424 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || | || || || || ||||| |||||| || | || || || |||| ||||| || Sbjct 3895423 TCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTCTTCCGCTGCCCAGACCTCCAT 3895364 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 ||| || || ||||| || || | || |||| | || || || |||||||| || Sbjct 3895363 TGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTT 3895304 Query 350092 TGAAGA 350097 || || Sbjct 3895303 CGAGGA 3895298 >seq23 Length=3271484 Score = 149 bits (164), Expect = 2e-30 Identities = 337/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || || || || || || ||||| || || |||||| || || || |||||| Sbjct 2129409 GCAGTCATCACCGTGCCCGCTTATTTCAACGACAACCAGCGCCAGGCTACTAAGGATGCT 2129350 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || || |||||||| ||||||||| Sbjct 2129349 GGTGCCATTGCTGGTCTCAACGTGCTCCGTATCATCAACGAGCCCACTGCAGCAGCAATT 2129290 Query 349730 GCATATGGGCTTGATAAA---ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || ||||| |||| | | ||| | || || ||||||| | ||| | Sbjct 2129289 GCTTATGGCCTTGGCTCCGGCAAGTCTGATAAGGAGCGTAACGTTCTTATCTACGATCTT 2129230 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || || |||| | ||| || | || ||||| Sbjct 2129229 GGTGGTGGTACTTTCGATGTGTCTCTCCTTAACA-TCCAAGGTGGTGTCTTCACTGTTAA 2129171 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || ||||| || ||||| || ||||||||| |||| ||||||| ||| | || Sbjct 2129170 GGCTACTGCCGGAGATACCCACCTTGGTGGACAAGACTTTGATACCAACCTCCTGGACCA 2129111 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT---TGGAGATAATCCTAGAG 349961 || || || || |||| |||| || | || | |||||| | |||| Sbjct 2129110 CTTCAAGAAGGAGTTCCAGCG-CAAGACTGGCAAGGACCTCTCTGGAGACG---CGAGAG 2129055 Query 349962 CAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCC 350021 | | |||||||| ||||| || || || |||||||||||| | || || |||||| Sbjct 2129054 CCCTCCGTCGCCTCAGAACCGCTTGCGAGCGTGCTAAGCGTACTTTGTCCAACGCTACCC 2128995 Query 350022 AAACCTCTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACA 350080 | ||| || | ||||| || ||| ||| | |||||| | || ||| ||| || || || Sbjct 2128994 AGACCACTGTGGAAATCGACTCT-TTGTTCGATGGCGAGGACTTCAATTCCTCCATCACC 2128936 Query 350081 CGTGCTCGGTTTGAAGA 350097 |||||||| |||||||| Sbjct 2128935 CGTGCTCGCTTTGAAGA 2128919 >seq24 Length=3695433 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| |||||||| || ||||| || || || || || Sbjct 2676878 CATACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTC 2676937 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || ||||| || | || || ||||| ||||| | ||| ||||| || || Sbjct 2676938 GGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGG 2676997 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || || ||||| || | || || |||||||| | || || | ||| Sbjct 2676998 GGGGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTC 2677057 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| | ||| | |||||||| || || || || || || |||||||| Sbjct 2677058 AACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 2677108 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || || || |||||||| || || || Sbjct 2677106 CATACCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTC 2677165 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || |||||||| ||||| ||||| ||||| || || Sbjct 2677166 AGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGG 2677225 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || | || ||||| || || | ||||| | || Sbjct 2677226 GGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTC 2677285 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || ||||| || | ||||||||||| || || || || Sbjct 2677286 CACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 2677324 Score = 111 bits (122), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || |||||||| ||||||||||| || || || || || || Sbjct 2677407 CATACCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 2677466 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || ||||| || || || ||||| || ||||| ||||| ||||| || || Sbjct 2677467 ACTAAGCGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGG 2677526 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||| || || || |||||||| || || | || || || || || | ||| | ||| | Sbjct 2677527 AGGGATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATC-GCTGGACT 2677585 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || | ||||| ||||| Sbjct 2677586 CGACCTCGAGGGTGATGGTCTTGCCGGT 2677613 >seq14 Length=4837378 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 |||||||||||||||||||| || || || | || || | ||||||||||| ||||| Sbjct 608831 ACACCAGCAAAGTGGAAAGTGTTGAGTGTCATCTGCGTGGCAGGCTCACCAATAGACTGA 608890 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596 || |||| || ||||||||||| ||||| ||| || ||||| Sbjct 608891 GCAGCAAGCACACCAACCATTTCACCAGGGTTGGCACCAGCCT 608933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253817574090