Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq24 190 2e-43 seq18 141 1e-28 seq14 123 3e-23 seq7 104 3e-17 >seq24 Length=3695433 Score = 190 bits (210), Expect = 2e-43 Identities = 171/215 (80%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| ||||| || || |||||||| ||||| ||| | ||| | Sbjct 2677324 GTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGAC 2677265 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| ||||| | || ||||||||||||||||| ||||| || |||||||||||||| || Sbjct 2677264 AATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATC 2677205 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||| ||||| || ||||||| |||||||| | ||||| || | ||||||||| Sbjct 2677204 TTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAA 2677145 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| ||||| || ||| | ||||| || ||||| Sbjct 2677144 TCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGG 2677110 Score = 158 bits (174), Expect = 1e-33 Identities = 174/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| |||||||||||||| ||||| || ||||| ||| || | Sbjct 2676880 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAG--AGCT 2676823 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| || | ||| |||| ||||| || |||||||| ||||| || |||| Sbjct 2676822 CGGATACCATTGATAACGTCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACC 2676763 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||||||||| | || |||| ||||| || | || || | Sbjct 2676762 AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACA 2676703 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| |||||| || || || | ||||| || || ||| Sbjct 2676702 ACATCCAGAAGGAGAGCACTCTGCACCTGGTGCTCCGTCTCCGTGGCGGA 2676653 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || || | || ||||| || Sbjct 2677108 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 2677049 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | || ||||| |||||||| || || || || |||||| Sbjct 2677048 GACACAATTGATAACGTTAAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCAG 2676989 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || ||||||||||| | ||||||| |||||| | | ||||| || Sbjct 2676988 CAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAAC 2676929 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || |||||||||||||| || ||| | ||||| || ||||| Sbjct 2676928 ATCCAGAAAGAATCCACTCTTCACCTTGTCCTTCGTCTCCGTGGTGG 2676882 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||| ||||| | |||| ||| | || | ||| | Sbjct 2677613 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACGTCAAGACC 2677554 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| |||||||| || ||||| |||||||||||||| || || || || ||| Sbjct 2677553 AAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAAAG 2677494 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| || || || ||||| || |||| ||||| || ||||| ||| Sbjct 2677493 CAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTCCAT 2677434 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || ||||| Sbjct 2677433 CTTGTCCTCCGCCTGCGTGGTGG 2677411 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 80037 CGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGA 80096 ||| ||||| |||||||| |||||||| || ||| ||||||||||| | |||||| Sbjct 1323265 CGTGCGCAGGTAGTACATACCCGTCTTCAGACCCATCTTCCAGCCGGCAAAGTGCATGCT 1323324 Query 80097 ACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGAT 80156 ||| ||| | | ||||| | || || | |||||| || ||||||||||| || Sbjct 1323325 GGTGATCTTGCCCATGGTGGGCTCCTTCAGGTGGATGTTGAGGGACTGAGACTGGTCAAT 1323384 Query 80157 GAAAGCCCCACGATCTGCCGCCAT 80180 ||| || ||||| || || ||||| Sbjct 1323385 GAACGCACCACGGTCCGCTGCCAT 1323408 >seq18 Length=3504694 Score = 141 bits (156), Expect = 1e-28 Identities = 336/501 (67%), Gaps = 15/501 (3%) Strand=Plus/Minus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || ||||| || |||||||| |||||| | | | | |||| | || | ||||||| Sbjct 126315 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGT 126256 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 |||| ||||| || || || || || ||||| || || || ||| ||| || ||| Sbjct 126255 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTC 126196 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| || || ||||| ||||| | || || |||||||| |||||||| Sbjct 126195 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 126136 Query 64840 GACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAGGA-CAAA 64896 |||||||| || ||| || || || || || |||||| |||||| || | | Sbjct 126135 GACGAGGGTCTGCACACCGACTT--CGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCC 126078 Query 64897 CCATCACATGGGACTATAATTG-ATATAGTAAAATC--GGCTGTAGAAATTGAAAAGGAA 64953 ||| || | || | ||| | | | || || ||| || | ||||| |||| Sbjct 126077 CCAGCAAACAGG----TTGTTGAAGACATTATCGTCGAGGCCGTCGGCATTGAGCAGGAG 126022 Query 64954 TTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAAACAG 65013 ||| | |||| ||| || || | ||| | |||||| | || | |||| ||| Sbjct 126021 TTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAG 125962 Query 65014 TATATCGAATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATTAAGCCCTACTGGAAT 65073 || ||||| ||||| || || |||||||| | || | ||| |||| || Sbjct 125961 TACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAAC 125902 Query 65074 TCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTT 65133 | | || || || |||| |||||| ||||| |||| ||| ||||| ||||| || Sbjct 125901 GCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTC 125842 Query 65134 GAAAAGAGGGTAGGTGATTAC 65154 || ||| ||||||| || ||| Sbjct 125841 GAGAAGCGGGTAGGAGACTAC 125821 >seq14 Length=4837378 Score = 123 bits (136), Expect = 3e-23 Identities = 140/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 2951562 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 2951621 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| || || || || ||||||||||| Sbjct 2951622 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCTT 2951681 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || ||||||||||| || ||||||| || ||||| ||| ||||| || |||| || Sbjct 2951682 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 2951740 Query 27594 GGAAT 27598 || || Sbjct 2951741 GGTAT 2951745 >seq7 Length=6264467 Score = 104 bits (114), Expect = 3e-17 Identities = 107/139 (77%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 27494 TTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAAC 27553 ||||| |||||||||| || || || |||||||||||||| || || ||||||||||| | Sbjct 1750264 TTCAG-ACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGC 1750322 Query 27554 TCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAG 27613 ||||||| | ||||| || | ||||| || |||| ||||| ||||| || || | | Sbjct 1750323 TCGAGGACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGG 1750382 Query 27614 TCTTGCGTCTTCGCGGTGG 27632 | | || || || ||||| Sbjct 1750383 TGCTCCGCCTGCGTGGTGG 1750401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310186133600