Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq24 132 7e-26 >seq24 Length=3695433 Score = 132 bits (146), Expect = 7e-26 Identities = 462/717 (64%), Gaps = 8/717 (1%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || || || || || | |||||| |||| ||||| ||| || || || | || | | Sbjct 1324437 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 1324496 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | ||| ||| || ||||| || ||||| || |||| || ||| || Sbjct 1324497 CAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAGAAC 1324556 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| || || || || ||||| || || |||||||| | Sbjct 1324557 AGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCGAAG 1324616 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| || ||||| || || || || || || | | |||| || || || || || ||| Sbjct 1324617 ACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACCC 1324676 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | |||||||||||||| || |||| | | ||| |||| || ||||| || Sbjct 1324677 TGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGAG 1324736 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 ||||| || || ||| ||| ||| ||| | || || | || || Sbjct 1324737 GTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACCA 1324796 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || ||||| | ||| || ||||| ||||| ||||| || || Sbjct 1324797 ATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTCA 1324856 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || || || ||| |||||| | || || || | | ||| | || ||| || Sbjct 1324857 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTACCA 1324916 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 || || |||| || || || || |||||||| | || | || | | | ||| || Sbjct 1324917 GCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTAGGTC 1324976 Query 77060 TCAATAACTGCTTCT--ATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATAT 77117 || || | ||||| || || | || || || || || |||||||||| || | Sbjct 1324977 TCGATGGC--CTTCTCGATGTCACTACCGTGGATACCAACGGCAACACGCATCAGCAGGT 1325034 Query 77118 GCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTT 77177 |||| || || || | ||| || || ||||| |||||| |||| || | Sbjct 1325035 GCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTATGACCGCTCCAGGGTCT 1325094 Query 77178 TAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 | || || || ||||||| ||||| || | ||||| | |||| |||| || || Sbjct 1325095 TGAAGCCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTAAG 1325149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934132649600