Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001741915.1_202016-09-21] 30 sequences; 36,450,809 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq24 131 4e-25 >seq24 Length=3695433 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| |||||||| || ||||| ||||||||||| |||| || || | ||||| Sbjct 2676897 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCC 2676956 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || |||||||| | | ||||||||||| | ||| |||||||| ||| Sbjct 2676957 TCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCT 2677016 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | |||| ||| || ||||| | || || || Sbjct 2677017 TGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTC 2677076 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||||||||| ||||||| |||||| Sbjct 2677077 TTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 2677108 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || || ||||| ||| || |||||||||||||||| | || | Sbjct 2676662 GAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGCGTACG 2676721 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| | || || |||||||| || | ||||||||||| | || || || Sbjct 2676722 TCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTC 2676781 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| |||||||| || ||||| | || | | | || || ||||| || || || || Sbjct 2676782 CTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGT 2676841 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || ||||| || |||||||||||||||| |||||| Sbjct 2676842 AATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 2676880 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || ||||| || || || ||||| |||||||| || | | || | ||||| Sbjct 2677125 AGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCC 2677184 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || |||||||| || | ||||||||||| | || || ||||| | Sbjct 2677185 TCCAGCTGCTTT--CCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGT 2677242 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | ||||| || || ||| | || | | |||| ||| ||| || ||||| || || | Sbjct 2677243 CCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGG 2677302 Query 152071 TTTTGCCCGTGAGAGTCTTCACGA 152094 | || || || || ||||| |||| Sbjct 2677303 TCTTTCCGGTCAGGGTCTTGACGA 2677326 Score = 93.3 bits (102), Expect = 1e-13 Identities = 142/196 (72%), Gaps = 10/196 (5%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAA-AGTTCTCCCAT 151950 |||||||||||| ||||||||||| || ||||||||||| || |||| || | |||| Sbjct 2677425 GAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC-ACTAAGCGTGCGGCCAT 2677483 Query 151951 CTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 | || || ||||| ||||||||||| || | ||||||||| | | ||| || ||||| Sbjct 2677484 CCTCCAGCTGCTTT--CCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTT 2677541 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTA 152066 || || || || ||||| | || | | | | ||| | ||| || || || || Sbjct 2677542 ATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGA--CTCGACCTCGAGGGTG 2677599 Query 152067 ATAGTTTTGCCCGTGA 152082 || || ||||| |||| Sbjct 2677600 ATGGTCTTGCCGGTGA 2677615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820356500130