Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq190 149 9e-31 seq151 131 2e-25 >seq190 Length=682122 Score = 149 bits (164), Expect = 9e-31 Identities = 475/728 (65%), Gaps = 18/728 (2%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | ||||| | || ||||| ||||| || || | || | | Sbjct 233727 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 233786 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979 || || || | ||| || || ||||| || ||||| ||| |||| || || ||| || Sbjct 233787 CAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGC-ATAGAA 233845 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 ||||| | || ||| |||||| || || |||||| || || |||||| | | Sbjct 233846 CAGATCGCGGGCTCTGACCTCCTCCTTACCGTGATTCTTACGGAGGTCCAGGAACTCGAA 233905 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 | ||| || ||||| || || | ||| ||||| | | | || || || ||||| || || Sbjct 233906 GACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACC 233965 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| || | |||||| || ||||| || |||| | | ||| |||| || ||||||||| Sbjct 233966 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCATTGGA 234025 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 80217 ||||| ||||| || || || ||| | | || || | | || ||| Sbjct 234026 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTT--CAGA 234083 Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277 || || || || || | || ||||| | ||||| || || || || ||||| || Sbjct 234084 CCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCG 234143 Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---- 80333 || ||||| || || |||||| | || | ||| ||| | ||| | || Sbjct 234144 TCAATGCTGTCCTCCTTCATGTCGACGAGGA---AGCAAGAGGCAAGCTGA-GGCTGGGG 234199 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 ||| || || || || | || || || ||||| || || | || | |||| | | Sbjct 234200 AGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTG 234259 Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453 ||| ||||| || || || || || | || || || || || |||||||| | Sbjct 234260 GTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAACGGCAACACGCATCAG 234319 Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513 || |||||| || | ||| | | ||| || || ||||| ||| || |||| Sbjct 234320 CAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTATGACCGCTCCAG 234379 Query 80514 AGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 80571 || || || || || ||||||| ||||| || || ||||| | |||| ||||||| Sbjct 234380 GGTCTTGAAGCCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTA 234437 Query 80572 AGTTTATC 80579 || | ||| Sbjct 234438 AGCTCATC 234445 >seq151 Length=1390245 Score = 131 bits (144), Expect = 2e-25 Identities = 160/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || ||||| ||| ||||||||||||||| | | || || |||||||| Sbjct 1307266 AACAGCAGGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 1307207 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||| || |||||||| || ||||| || ||||| || || || || Sbjct 1307206 AAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCG 1307147 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 || |||||||| || || || || || || ||||| || | || | | | | | Sbjct 1307146 GAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCC 1307087 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 ||||| || |||||||| ||||||||||||||||| Sbjct 1307086 CTGTCCTGGATCCACTTAATGGCCCAATCGGCCTTCTT 1307049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266797825720