Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq151 150 3e-31 >seq151 Length=1390245 Score = 150 bits (166), Expect = 3e-31 Identities = 334/494 (68%), Gaps = 19/494 (4%) Strand=Plus/Plus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || ||||| | |||| ||| ||||||| | ||| |||| | | ||| | | Sbjct 1307049 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGT 1307108 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || || ||||| ||||| ||||| |||||||| || || || || ||||||| Sbjct 1307109 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTC 1307168 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 |||||||||||||| || |||||||| || || || | |||||| | || ||||| Sbjct 1307169 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 1307228 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604 |||||||| || ||| ||||| || || ||||| || || || | | | ||| Sbjct 1307229 GACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCC 1307288 Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664 | ||| | ||| | || | | ||||| | ||| ||||| | || || | Sbjct 1307289 A--GCAAA--CAG-GTTGTTGAAG------ACATTATCGTCGAGGCCGTCGGCATTGAGC 1307337 Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGT 125724 | ||||| || || || | || || || || | |||||||||| |||||| |||| Sbjct 1307338 AGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGT 1307397 Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA--- 125781 | ||||||| |||||||| || || || || ||| | | | ||| ||||| Sbjct 1307398 GTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTG---GTGGCCCTCGGCAACAAGAAGT 1307454 Query 125782 TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCA 125841 |||||||||| || ||||| || |||||| || || || | ||||||||||| Sbjct 1307455 ACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCA 1307514 Query 125842 ACTTTTTCGAGAAG 125855 |||| ||||||||| Sbjct 1307515 ACTTCTTCGAGAAG 1307528 Score = 131 bits (144), Expect = 2e-25 Identities = 208/291 (71%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| || || ||||| | ||| || |||||||| Sbjct 1306648 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAAATCGATCTG 1306707 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | || ||| || ||||| | || || || Sbjct 1306708 TCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCTCC 1306767 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 ||| || | || ||||| || | ||||||||| || |||||||| || | ||| || || Sbjct 1306768 CACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGA-GCG 1306826 Query 125198 ATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254 ||| ||| | ||| |||| |||| ||| ||||| ||||||||||| ||||| Sbjct 1306827 CTTCAGCGGCGAG--GTCCAGGTTCCTGAGG-CTCGTTGCTTCTACGGATTCCAGATCAT 1306883 Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||| |||||| | ||||| || | |||||| ||||| || | ||||| Sbjct 1306884 GATGGAGAACATCCACTCCGAGACCTACTCTCTCCTGATCGATACCTACAT 1306934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057134297480