Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq36 201 2e-47 seq38 199 6e-47 >seq36 Length=863356 Score = 201 bits (222), Expect = 2e-47 Identities = 224/294 (76%), Gaps = 4/294 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||||| | || || |||||||| || ||||||||||| |||| Sbjct 559360 CGCCAAGCGTCACCGTAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 559418 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| ||||| |||||||| ||||||||| |||| | || |||| ||||||| Sbjct 559419 TCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAGAGA 559478 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||| |||| | ||| ||||||| || |||| |||| |||||| || ||| || | Sbjct 559479 CTCGTGGTGTTCTCAAGTCCTTCCTCGAGTCCGTCATCCGTGATGCCGTCACCTACACTG 559538 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||||||| | || | ||||| || | || || || | Sbjct 559539 AGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTTGTCTACGCCCTCAAGCGCCAGG 559598 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAATCAAAC-TTCGAATGGA 16723 |||||| | || ||||| || ||||| | || |||| | |||||| ||| Sbjct 559599 GCCGTACCCTGTACGGTTTCGGTGGTTAAATTGCT-TTCAACCATTCGAAAGGA 559651 >seq38 Length=904499 Score = 199 bits (220), Expect = 6e-47 Identities = 194/247 (79%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | || || |||||||| || ||||||||||| ||||| Sbjct 724418 GCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 724476 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 724477 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 724536 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| |||||| || ||| |||| ||| ||| || ||| || || Sbjct 724537 CCGTGGTGTCCTCAAGACCTTCCTTGAGGGCGTCATCCGTGACGCTGTCACCTACACTGA 724596 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||||||| | || |||||||||| | || | || || Sbjct 724597 GCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCTCTTAAGAGACAGGG 724656 Query 16672 CCGTAAG 16678 ||||||| Sbjct 724657 CCGTAAG 724663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074996109539