Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq190 143 3e-29 seq151 134 2e-26 >seq190 Length=682122 Score = 143 bits (158), Expect = 3e-29 Identities = 581/904 (64%), Gaps = 20/904 (2%) Strand=Plus/Plus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 ||||||||||| || | |||| |||| ||||| ||| | || || | || | | Sbjct 233727 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 233786 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 || || |||| ||| || || ||||| || ||||| ||| |||| || || ||| || Sbjct 233787 CAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGC-ATAGAA 233845 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 ||||| | || ||| ||||| || || |||||| || || |||||| | | Sbjct 233846 CAGATCGCGGGCTCTGACCTCCTCCTTACCGTGATTCTTACGGAGGTCCAGGAACTCGAA 233905 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 | ||| || ||||| || || | ||| ||||| | | | || || || ||||| || || Sbjct 233906 GACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACC 233965 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||| || | |||||| || ||||| || |||| | | ||| |||| || ||| || || Sbjct 233966 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCATTGGA 234025 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 63494 |||| ||||| || || || ||| | | || || | | || ||| Sbjct 234026 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTT--CAGA 234083 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || || || || || | || ||||| | ||||| || || ||||| |||||||| Sbjct 234084 CCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCG 234143 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---- 63610 || ||||| || || |||||| | || | ||| ||| | ||| | || Sbjct 234144 TCAATGCTGTCCTCCTTCATGTCGACGAGGA---AGCAAGAGGCAAGCTGA-GGCTGGGG 234199 Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 ||| || || || || | || || || ||||| || || | || | || | | | Sbjct 234200 AGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTG 234259 Query 63671 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63730 ||| ||||| || || || || || | || || || || || |||||||| | Sbjct 234260 GTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAACGGCAACACGCATCAG 234319 Query 63731 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63790 || |||||| || | ||| | | ||| ||| || ||||| ||| || |||| Sbjct 234320 CAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTATGACCGCTCCAG 234379 Query 63791 AGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63848 || || || || || ||||||| ||||| || || ||||| | |||| ||||||| Sbjct 234380 GGTCTTGAAGCCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTA 234437 Query 63849 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGT 63908 || | ||| | ||| | | ||| || || |||| || || || | | || Sbjct 234438 AGCTCATCGGCGTGTTTCATGATTATTTCGTATGTCTCCTTTGATATCATTGGCGCAGGT 234497 Query 63909 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGttt 63967 | || || || || ||||||| | | | ||| || || || | || | || Sbjct 234498 TGGTTGTTCTTGGGGTTGACATAGTGGTAGAGATCTGAAATGAC-CAACGAGAACTGCTT 234556 Query 63968 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGG 64027 || || | |||||| || || || ||||| || | ||| || || ||||| || || || Sbjct 234557 CTTGGTCTGCTTGTGGAGGTTGGAAACGGCGATACGGGCAGCGAGGATGGCGTAGTCGGG 234616 Query 64028 ATGT 64031 |||| Sbjct 234617 ATGT 234620 >seq151 Length=1390245 Score = 134 bits (148), Expect = 2e-26 Identities = 162/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || ||||| ||| ||||||||||||||| | | || || |||||||| Sbjct 1307266 AACAGCAGGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 1307207 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || ||||| || |||||||| || ||||| || ||||||||||| || || Sbjct 1307206 AAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCG 1307147 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCT-CTCCATAACCG--GCG 33471 || |||||||| || || || ||||| || |||| || | || | | || | Sbjct 1307146 GAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCC 1307087 Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509 ||||| || |||||||| ||||||||||||||||| Sbjct 1307086 CTGTCCTGGATCCACTTAATGGCCCAATCGGCCTTCTT 1307049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945463534680