Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq34 113 3e-20 >seq34 Length=509863 Score = 113 bits (124), Expect = 3e-20 Identities = 197/287 (69%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||| ||||| ||| |||| | ||||| | ||||| ||||| |||||||| Sbjct 404567 TTCTACCGTTACAAGATGGAGCGCCTTCAGTCCAAGATTGAGGGCAAGGGCAACGGTATC 404626 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || |||||| | |||||| || |||||| || ||||| | || ||| | | ||| Sbjct 404627 AAGACCGTCGTCGTCAACTTGAACTCGGTCGCTCAGTCGCTCAGTCGGCCTCCGTCTTAC 404686 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || || || || | ||| ||||| |||||| | | | | || | || Sbjct 404687 GTGATCAAGTACTTTGGCTTCGAGCTTGGTGCTCAGGCCAACGCCAAGCCCACCGATGAT 404746 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 |||| ||| | ||||| | ||| | | ||||||| || |||| || ||||||||| Sbjct 404747 CGCTGGATCATCAACGGTGCCCATGATGCCCCCAAGCTTCAAGACTATCTGGACGGCTTT 404806 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||| |||||| |||||||| | |||| | || ||||| || || Sbjct 404807 ATTTCCAAGTTCGTGCTGTGCAAGAAATGTAAGAATCCGGAAACGGA 404853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946289676313