Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq190 143 3e-29 seq151 107 2e-18 >seq190 Length=682122 Score = 143 bits (158), Expect = 3e-29 Identities = 474/728 (65%), Gaps = 18/728 (2%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||||||||| || | |||| ||| ||||| ||| | || || | || | | Sbjct 233727 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 233786 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111 || || |||| ||| || || ||||| || ||||| ||| |||| || || ||| || Sbjct 233787 CAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGC-ATAGAA 233845 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 ||||| | || ||| ||||| || || |||||| || || |||||| | | Sbjct 233846 CAGATCGCGGGCTCTGACCTCCTCCTTACCGTGATTCTTACGGAGGTCCAGGAACTCGAA 233905 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 | ||| || ||||| || || | ||| ||||| | | | || || || ||||| || || Sbjct 233906 GACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACC 233965 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 ||| || | |||||| || ||||| || |||| | | ||| |||| || ||||||||| Sbjct 233966 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCATTGGA 234025 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 63349 ||||| ||||| || || || ||| | | || || | | || ||| Sbjct 234026 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTT--CAGA 234083 Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409 || || || || || | || ||||| | ||||| || || || || ||||| || Sbjct 234084 CCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCG 234143 Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---- 63465 || || || || ||| |||||| | || | ||| ||| | ||| | || Sbjct 234144 TCAATGCTGTCCTCCTTCATGTCGACGAGGA---AGCAAGAGGCAAGCTGA-GGCTGGGG 234199 Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 ||| || || || || | || || || |||||||| || | || | || | | | Sbjct 234200 AGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTG 234259 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585 ||| ||||| || || || || || | || || || || || |||||||| | Sbjct 234260 GTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAACGGCAACACGCATCAG 234319 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645 || |||||| || | ||| | | ||| ||| || ||||| ||| || |||| Sbjct 234320 CAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTATGACCGCTCCAG 234379 Query 63646 AGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63703 || || || || || ||||||| ||||| || || ||||| | |||| ||||||| Sbjct 234380 GGTCTTGAAGCCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTA 234437 Query 63704 AGTTTATC 63711 || | ||| Sbjct 234438 AGCTCATC 234445 >seq151 Length=1390245 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || || ||||| ||| ||| ||||||||||| | | || | |||||||| Sbjct 1307266 AACAGCAGGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 1307207 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || ||||| || |||||||| || ||||| || ||||| || || || || Sbjct 1307206 AAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCG 1307147 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCT-CTCCATAACCG--GCG 32828 || ||||| || || || || || || || |||| || | || | | || | Sbjct 1307146 GAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCC 1307087 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 ||||| || |||||||| ||||||||||||||||| Sbjct 1307086 CTGTCCTGGATCCACTTAATGGCCCAATCGGCCTTCTT 1307049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630233750800