Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq181 89.7 4e-13 >seq181 Length=428174 Score = 89.7 bits (98), Expect = 4e-13 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | || || || | |||||| | ||||| || || || Sbjct 10452 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 10511 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || | || | ||| | || | ||| ||||| ||||| || || || |||| Sbjct 10512 GACACAATTGA-TAACGTTAAGACCAAGATTCAA-GACAAGGAAGGCATCCCCCCGGACC 10569 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | || || || || || || || || |||| || || || ||| |||| Sbjct 10570 AGCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACA 10629 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | || || ||||||||||| || || Sbjct 10630 ACATCCAGAAAGAATCCACTCTTCA 10654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326822295745