Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq151 156 9e-33 seq165 123 5e-23 >seq151 Length=1390245 Score = 156 bits (172), Expect = 9e-33 Identities = 311/452 (69%), Gaps = 18/452 (4%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| ||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 1307524 TCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTG 1307465 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | |||||| || |||||||| | Sbjct 1307464 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCCGCGACAAACTCGATG 1307405 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | ||||||||||| | || | | || | || ||| | | Sbjct 1307404 TACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGG 1307345 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC----ACCTG-TGCCAGAG 251797 || |||| || || | || ||||| | | || || |||| ||||| | | | | Sbjct 1307344 AACTCCTGCTCAATGCCGACGGCCTCGACGATAA-TGTCTTCAACAACCTGTTTGCTGGG 1307286 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCG 251856 | | ||||| ||| | ||| |||| | || || || | | ||||||||||||| Sbjct 1307285 GC-GGTTGTT---CAGGTGGGAGAACAGCAGGCAAGCGAAGTCGGT-GTGCAGACCCTCG 1307231 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||||| ||||||||| | || |||||||| | ||||| ||| ||||| Sbjct 1307230 TCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGC 1307171 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACA 251976 |||||||| | ||||| || ||||| | | |||||| || | | ||||| Sbjct 1307170 CAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACG 1307111 Query 251977 AGGCGCTCAGCAAA---CGACT---TGTCCTG 252002 || |||| ||| || ||||| ||||||| Sbjct 1307110 AGACGCTGAGCGAAGGTCGACTCCCTGTCCTG 1307079 >seq165 Length=136143 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| |||||| || || || |||| ||||||||||| ||| Sbjct 90460 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAAC 90401 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 ||| ||||| | |||||||||| | || || ||||| |||| ||||| || | Sbjct 90400 CAGACCAGCCTCCGCCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGCCCCAACGGTACC 90341 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| ||| || ||||| ||||| |||| ||||| || || || || || Sbjct 90340 GGTAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 90281 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557 |||||| | ||| || || || ||||||||| Sbjct 90280 GATGAGGTCAAGACCGTCTACGTCGAGCACGAC 90248 Score = 95.1 bits (104), Expect = 2e-14 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205 ||||| || || ||| || |||| ||||| || ||||| ||||| ||||| |||||| Sbjct 89659 CAGGTCTCCCTGGGCTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGTAAATCTACC 89600 Query 280206 CTAATCAAAGTCCTGACTGGCGAG---ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCAT 280262 || |||| |||||||| || ||| | || |||||| | ||| | |||| Sbjct 89599 CTGGTCAACGTCCTGACCGGTGAGTTGATCCCCACCACTGGTGA---CGTCTACCAGCAC 89543 Query 280263 CCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTG 280322 ||||| || || || ||| || |||||||||||| ||||| || |||||||| Sbjct 89542 GAGAACATCCGTATCGCCTACATCAAGCAGCACGCTTTCGCTCACATTGATAACCACCTC 89483 Query 280323 GACATGACTCCTAACCAATACATTCAGTGGCG 280354 ||| ||||| | | ||||| |||||||| Sbjct 89482 GACTCCACTCCCTCCGAGTACATCCAGTGGCG 89451 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/133 (76%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCC--ATTCTACTGCGTG 279759 || || || ||||||||||||||||||||||| || | || ||| ||| | | | Sbjct 90100 TCCCTCTCCGGTGGTTGGAAGATGAAGCTGGCTCTGGCCCGTGCCGTCTTCGAGTCC--C 90043 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 ||||| |||| ||||| |||||||| ||||||||| ||||| || ||||| |||||| Sbjct 90042 CCGATATCCTGCTGCTCGATGAGCCTACCAACCACTTGGACGTCAAGAACGTCGCCTGGT 89983 Query 279820 TAGTGTCCTACCT 279832 | | | |||||| Sbjct 89982 TGGAGAACTACCT 89970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027833863277543