Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq151 239 8e-58 seq190 156 8e-33 >seq151 Length=1390245 Score = 239 bits (264), Expect = 8e-58 Identities = 369/518 (71%), Gaps = 13/518 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 |||||||| |||||||| || ||||| | || |||||| || || | || Sbjct 1307037 CCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACC 1307096 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| || | || || || || | ||||| ||||| ||||||||||| ||| ||||| Sbjct 1307097 TTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTC 1307156 Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || |||||||||||||||||| || ||| || ||||| || ||||||||||| ||||| Sbjct 1307157 GCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGCCTGGTCTCACCTTCTCCAACGA 1307215 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 |||||| | |||||||| ||||| | ||||| || ||||| |||||||| ||| Sbjct 1307216 GCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTC---CCA 1307272 Query 42872 CCTCAGGCACAA--GCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928 ||| | |||| |||| | || || || | ||| ||| |||||||| | Sbjct 1307273 CCT---GAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATTATCGTCGAGGCCGTCGG 1307329 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGA 42988 || ||| |||||||||| || | | |||||||| | ||| | ||||||||| | | Sbjct 1307330 CATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAA 1307389 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCA 43047 || ||||| |||||||| ||| ||||| |||| || || ||| | | || || Sbjct 1307390 GCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGC-CCTCGGCAACA 1307448 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 ||||||| | | |||||||||||| |||||| |||||| ||| ||| | Sbjct 1307449 AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTA 1307508 Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||||| ||||||||||| || | ||||||||| Sbjct 1307509 AGACCAACTTCTTCGAGAAGCGGGTAGGAGACTACCAG 1307546 >seq190 Length=682122 Score = 156 bits (172), Expect = 8e-33 Identities = 727/1144 (64%), Gaps = 39/1144 (3%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| ||| || ||||||| | || | |||||||||||| || ||||| Sbjct 232523 ACGGTGAACTGGATGGGCGCAGAGGCGGCCATCGTGCGCAGGTAGTACATACCCGTCTTC 232582 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || | |||| || | ||||||| || | ||| ||| || ||| Sbjct 232583 AGACCCATCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGCT----- 232637 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 ||| ||| || |||||||||||| |||||| | ||| | | || || Sbjct 232638 ----CCTT---CAGGTGGATGTTGAGGGACTGAGACTGGTCAATGAACGCACCACGGTCC 232690 Query 243917 GCGGCCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 || ||||| | || |||| ||| || ||||| || |||||||||| | | ||| Sbjct 232691 GCAGCCATCTGCAGGATCGTCCG-CTGGGAGATCTCCCACACCGTCTTGTACAGCGCCTT 232749 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || ||||| ||||||||| || || || | | | |||| || | Sbjct 232750 GATGTCACTGGGGATGTTGGGGATGTTCTGGACGGAACCACCCTCGGCAATGATGCGGTT 232809 Query 244036 GCGCATGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCA 244094 |||||| || ||||||||| | | || |||| ||| | ||| ||| | Sbjct 232810 CTTCATGTTGTCCGACCACAGGCCGAGATCGA-CCAGGTCCTTCAGCAGCCAGGGGTTGA 232868 Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154 ||||||| ||||| || | || || ||||| ||||| |||| | | ||||||| Sbjct 232869 CCACCTGGAACTCACCAGCCAAGACACGGCGGGAGTAGATGTTGGAGGTATAAGGCTCGA 232928 Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214 || ||| || ||||| ||||| || || ||||| |||||||| | ||||||| Sbjct 232929 AGCACTCGTTGAAGCCCAAGATCTGACTGGTACTGGCAGTGGGCATGGGGGCGACCAGCA 232988 Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTC-CAGTCCCACATG 244273 ||||| | || || ||||| ||| | || || | ||| |||| | Sbjct 232989 AGCTGTTGCGGACACCAG---TCTGG--GCGATCT-TGGCCTTGAGGGCAG-CCCA---G 233038 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG 244333 || ||||||| | | || || |||||||||| |||| || | |||| | ||| Sbjct 233039 TCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGGATACCCTGGGAGACA 233098 Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCG 244393 || |||||||||||| ||| | ||| || ||| || | | || Sbjct 233099 GGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGATCGGACGAGGCGGTC 233158 Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453 | | |||| |||||||||||||||||| |||||| | | ||||| | | || Sbjct 233159 AAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGTCTGGCCTCGGCCGAG 233218 Query 244454 GTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATG 244513 |||||| | || | | ||| | || ||||| || | || || | | ||| Sbjct 233219 TCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTTGACACCCAGAGCAATG 233278 Query 244514 GGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATC 244573 || | ||| || |||||| | |||| || || |||||||| ||||| |||||| Sbjct 233279 GGACGGTGACGGAAGTTGGACTTCTTGGCCTCCGGGACGGGGTAGTAGTTGATGTCGATG 233338 Query 244574 ACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTAC 244633 | |||||| | ||| ||| | | ||||||| ||| ||| |||||| ||| Sbjct 233339 ATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTGGAGCTTGCCAAAGTCATAC 233398 Query 244634 TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGG 244693 ||| | || | | ||| | ||| | | ||||| | ||| ||| Sbjct 233399 TCGCCGCGAGCAGCATCGACG-----------AAAGTAGGA-AGGGCAAGAGAGGCAAGG 233446 Query 244694 TTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTG 244753 |||||||| || ||||| |||| |||||| | ||||| ||||||||||| | Sbjct 233447 TTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCAGAGGTTGGAG 233506 Query 244754 CACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGC 244813 | |||||| || |||| || || ||| ||| |||||| || |||||||| ||| Sbjct 233507 CTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGC 233566 Query 244814 ATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCC 244873 |||||||| || |||||| ||| || | || | || |||||| | | |||| Sbjct 233567 ATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCAGAGCTTCTGAGCC 233626 Query 244874 TTGA 244877 |||| Sbjct 233627 TTGA 233630 Score = 154 bits (170), Expect = 3e-32 Identities = 363/534 (68%), Gaps = 18/534 (3%) Strand=Plus/Plus Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC-GGGGCA-CGACGCCGGG 244972 ||| ||||| ||||||||| || |||| || | | ||| ||||| || | ||| Sbjct 233717 GTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTG--GGG 233774 Query 244973 CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAG 245032 || | ||| |||| |||||| ||| || | || |||||| || || || |||| Sbjct 233775 CAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCAC 233834 Query 245033 AGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTG-TTCTTCCTCAGC 245089 ||||| | ||| || || | || ||||| ||| ||| || ||| ||||| | || Sbjct 233835 AGGGCATAGAACAGATCGCGGG--CTCTGACCTCCTCCTTACC-GTGATTCTTACGGAGG 233891 Query 245090 TCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGC 245149 |||| || || ||||| || |||||||||||| | ||||| || | || ||||| Sbjct 233892 TCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGA 233951 Query 245150 CGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGG 245208 ||||||||||| |||||||| || || | || | |||||| | || || | || Sbjct 233952 CGCTTGTTGCCACCCTGGTCAACGTATCTGGC-AGTGTTGTTGAAAACCCGAAGCATGGG 234010 Query 245209 CACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTT---GCCCCTGAG 245265 || | || || ||| ||||||||||| ||||| | || | || || | Sbjct 234011 AACAAGACCATTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCG 234070 Query 245266 GTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGAT 245325 | ||| | | || || | || |||||| ||||||||| | ||||| |||| | Sbjct 234071 G-TGC--ACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAA 234127 Query 245326 GGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAG 245385 ||||| || || || ||||||||| |||||||| || || ||||| |||| || Sbjct 234128 AGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAG 234187 Query 245386 CTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||| |||| ||| | | | |||||||||||| ||| |||||| || ||||| Sbjct 234188 CTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTA 234241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336567654480