Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq151 224 2e-53 seq190 136 6e-27 >seq151 Length=1390245 Score = 224 bits (248), Expect = 2e-53 Identities = 352/499 (71%), Gaps = 11/499 (2%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| ||||||||||| ||| ||| || || || |||||||| |||| ||||| Sbjct 1307528 CTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTT 1307469 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| |||| ||||| ||| |||||| | ||| || ||||| || Sbjct 1307468 GGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCCGCGACAAACTC 1307409 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 |||||| ||||||| ||| |||| || |||||||| |||||| || || || | Sbjct 1307408 GATGTACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGCAACGGGCAGAGCGTCAGT 1307349 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAA--TCTGCGA-GACACGTTCG-T 159884 ||| ||||||| |||||| |||| || ||| | || ||| | | || ||| | | Sbjct 1307348 CAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATAATGTCTTCAACAACCTGTTTGCT 1307289 Query 159885 ACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 ||| ||| || ||| ||||| ||||| || |||||| |||||| | Sbjct 1307288 GGGGCGG-TTGTTCA------GGTGGGAGAACAGCAGGCAAGCGAAGTCGGTGTGCAGAC 1307236 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 ||||||| |||||||||| ||||||||| | | |||| || ||||||| |||||| | Sbjct 1307235 CCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTTCT 1307176 Query 160005 TGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACG 160064 ||||||| || |||| || || | ||| || ||||| ||||| ||||| || || | Sbjct 1307175 TGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAAG 1307116 Query 160065 CCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAG 160124 | ||||| | || | | || | | | |||| ||| ||||| | ||||||| || | Sbjct 1307115 CAACGAGACGCTGAGCGAAGGTCGACTCCCTGTCCTGGATCCACTTAATGGCCCAATCGG 1307056 Query 160125 CCTTCTTTGCGATGCACGG 160143 ||||||| || ||||| || Sbjct 1307055 CCTTCTTGGCAATGCAGGG 1307037 >seq190 Length=682122 Score = 136 bits (150), Expect = 6e-27 Identities = 455/692 (66%), Gaps = 22/692 (3%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || |||||||| |||| | || | |||| | | | ||| |||||||| | Sbjct 232516 CTGGTCGACGGTGAACTGGATGG-GCGCAGAGGCGGCCATCGTGCGCAGGTAGTACATAC 232574 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| || ||| ||| ||| ||| | ||||||| | | |||| || | ||| Sbjct 232575 CCGTCTTCAGACCCATCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGG 232634 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017 | || || ||| ||||| || ||||| ||||| ||||| | | || || || | Sbjct 232635 GCTCCTTCAGGTGGATGTTGAGGGACTGAGACTGGTCAATGAACGCACCACGGTCCGCAG 232694 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTG 204076 |||| | | || ||| ||| || |||||||||||||||||| ||| || || || || Sbjct 232695 CCATCTGCAGGATCGTCCGCTGGGAGATCTCCCACACCGTCTTGTACAGCGCCT-TGATG 232753 Query 204077 T-GTTGAGGCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 | || || || || | || || || || || ||||| || | | || Sbjct 232754 TCACTGGGG---ATGTTGGGGATGTTCTGGACGGAACCACCCTCGGCAATGATGCGGTTC 232810 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | ||| ||||| ||| | || ||| ||| || ||| |||||||| Sbjct 232811 TTCATGTTGTCCGACCACAGGCCGAGATCGACCAGGTCCTTCAGCAGCCAGGGGTTGACC 232870 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | || || | |||| | | | |||| ||| | || ||||| Sbjct 232871 ACCTGGAACTCACCAGCCAAGACACGGCGGGAGTAGATGTTGGAGGTATAAGGCTCGAAG 232930 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||||||| ||| || |||||| ||| ||||| ||||||||||| || | |||| | Sbjct 232931 CACTCGTTGAAGCCCAAGATCTGACTGGTACTGGCAGTGGGCATGGGGGCGACCAGCAAG 232990 Query 204314 GAGTTGCGCACACCGTATTTTTG--GACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCG 204371 |||||| ||||| | | | | || | || ||| || | | |||||| | Sbjct 232991 CTGTTGCGGACACC--AGTCTGGGCGATCTTGGCCTTGAGGGCAGCCCAGTCCCAGAGGT 233048 Query 204372 CACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431 || |||| | | ||||||||||| |||||| ||| || || ||| || |||| Sbjct 233049 CAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGGATACCCTGGGAGACAGGAGATCCCT 233108 Query 204432 TGTACGTCGGATAAG-GCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCA---TGGCG 204487 ||| ||| |||| | || ||| | || || | | ||||||||| || ||| Sbjct 233109 CGTAGGTCTCGTAAGTTCCGA-ACTCCTTGGCGAGATCGGACGAGGCGGTCAAACCAGCG 233167 Query 204488 TGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 |||||| |||||||| |||||||| | ||| Sbjct 233168 TGATAG---ATGGTCTCGAAGATCTGGATGTT 233196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795152983504880