Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq145 82.4 6e-11 >seq145 Length=414362 Score = 82.4 bits (90), Expect = 6e-11 Identities = 184/271 (68%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 30117 CTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATG 30176 |||||| || ||| || ||||| || | | | ||| || || || |||||||| Sbjct 189442 CTGATCGACACCCTGACCGGAGTAATCCGTCTTGGCGTCGACATATTCCGCCCCGAAATG 189383 Query 30177 CCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCT 30236 ||||||||||| |||||||| || || ||||| || |||| | |||| ||| || Sbjct 189382 TCTCCACTGGAAGCCGTACACGGGACCGAGGTCGCCGACTTCGCGGTGC-GAAAGACCGA 189324 Query 30237 C-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCGGA 30293 | ||||| | | || | ||| || ||| | |||||||| || | ||| |||| | || Sbjct 189323 CTTTGTCGAGGTATTCGCGGGAGCCATTGCCATCCCAGATTTTGATCCCGGCTTCGCTGA 189264 Query 30294 -GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 30352 | || |||| | ||| || || |||||| || || || | | |||||| Sbjct 189263 GGGGCAGGGAGGAGGTCGTG---CCGGAGATGAACCAGAGGAGTTCGGCGAGGACGGCGC 189207 Query 30353 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | ||||| | |||||| ||||||||||| Sbjct 189206 GCAGGAAGACGCGCTTGGTGGTGAGGAGGGG 189176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616489453979