Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq151 208 1e-48 seq190 125 1e-23 >seq151 Length=1390245 Score = 208 bits (230), Expect = 1e-48 Identities = 355/510 (70%), Gaps = 21/510 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| ||| ||| |||||| ||| Sbjct 1307546 CTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 1307487 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTC----AGGCCCATCTGTTC 47952 ||||||| ||||||||||| | ||| || | | ||| ||| ||| | Sbjct 1307486 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCA------C 1307433 Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||||| | |||||||| |||||||||| | |||| || || ||||||||| | Sbjct 1307432 CAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAG 1307373 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 || | ||||||| ||| | || || ||||||| ||| || ||||| || | | Sbjct 1307372 CAGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGAT 1307313 Query 48073 AATCTGCTTAACG--CGGGACTCTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCAT 48129 ||| | | ||| | | ||| || | ||||| |||||| || | |||| Sbjct 1307312 AATGTCTTCAACAACCTGTTTGCTGGGGCGGTTGTT---CAGGTG---GGAGAACAGCAG 1307259 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || ||||| |||||| || ||||| || ||||||| ||||||||||| ||| Sbjct 1307258 GCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAG 1307199 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||||||||| || | || ||||||||||| || | ||||| ||||| |||||||| Sbjct 1307198 ACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAA 1307139 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||| ||||| || || ||||| || ||| | || |||| | | | | |||| Sbjct 1307138 GATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCTGTCCTG 1307079 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 |||||| || ||||| || |||||||| Sbjct 1307078 GATCCACTTAATGGCCCAATCGGCCTTCTT 1307049 >seq190 Length=682122 Score = 125 bits (138), Expect = 1e-23 Identities = 299/449 (67%), Gaps = 5/449 (1%) Strand=Plus/Plus Query 213793 TCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851 ||||||| |||| | ||| || | || ||||||||| ||||| |||||| || | Sbjct 233785 TCCAGTCGCCGTTCGCCTCA-ACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAG 233843 Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911 ||||| || | || || ||| ||| || || || || || || || || || Sbjct 233844 AACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGATTCTTACGGAGGTCCAGGAACTCG 233903 Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCG 213968 |||| |||| |||||| ||||| | |||||||||||| || || | || | ||||| Sbjct 233904 AAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCA 233963 Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028 |||||||| || ||||| ||||||| | || || | ||| || || || ||| Sbjct 233964 CCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCATTG 234023 Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGC 214088 || |||||||| || | || || || |||| | | | | | || | || Sbjct 234024 GAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGA 234083 Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCG 214148 || || ||||||||| |||||||||||| ||||| | ||| ||| || ||| ||| Sbjct 234084 CCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCG 234143 Query 214149 GCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAG 214208 | |||||||| || | | || | | |||||| | ||||| ||| || | Sbjct 234144 TCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTA 234203 Query 214209 CCAGAGTTGAAAAGCGTGGGGCTGGCATG 214237 |||| |||||| || || ||| ||| || Sbjct 234204 CCAGCGTTGAACAGAGTCGGGGAGGCGTG 234232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530203352320