Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq190 150 3e-31 seq151 122 2e-22 >seq190 Length=682122 Score = 150 bits (166), Expect = 3e-31 Identities = 372/557 (67%), Gaps = 12/557 (2%) Strand=Plus/Plus Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004 ||||| ||| |||| |||||||| | || ||| ||| || | ||| || Sbjct 233718 TAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAG 233777 Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064 | |||| |||||| ||| | | || | || |||||| || ||||| ||||||| Sbjct 233778 AACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGG 233837 Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTG--CTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 || | || ||||| | || | ||| ||||||| |||| || || | || |||| Sbjct 233838 GCATAGAACAGATCGCGGG--CTCTGACCTCCTCCTTACCGTGATTCTTACGGAGGTCCA 233895 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||| || | || | |||||| ||||| || |||| ||| | ||| ||||| |||| Sbjct 233896 GGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCT 233955 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACC 222241 ||||||||||||| || || || ||| | |||||| | ||||| | || || Sbjct 233956 TGTTGCCACCCTGGTCAACGTATCT-GGCAGTGTTGTTGAAAACCCGAAGCATGGGAACA 234014 Query 222242 AGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG 222301 || || ||||| |||||||||||| |||||| | ||| | | || | | | Sbjct 234015 AGACCATTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGC---GGATGCGG 234071 Query 222302 -GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTG 222358 ||| || || |||||||||||| || |||||||| ||||| |||| | |||| Sbjct 234072 TGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTG 234131 Query 222359 TCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGA 222418 || ||| || || || ||||||||| | || | || || ||||| | | |||| Sbjct 234132 TCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGA 234191 Query 222419 GATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 | | || | || ||||| ||||| || || |||||| || ||||| | ||| Sbjct 234192 GGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGAC 234251 Query 222479 ATCAGATCGTACGTCTC 222495 |||| | ||| ||||| Sbjct 234252 ATCAAGTGGTAGGTCTC 234268 >seq151 Length=1390245 Score = 122 bits (134), Expect = 2e-22 Identities = 326/499 (65%), Gaps = 25/499 (5%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 |||||||| ||||||||| | | ||| | | | || || | |||| || || || || Sbjct 1307061 TGGGCCATTAAGTGGATCCAG-GACAGGGAGTCGACCTTCGCTCAGCGTCTCGTTGCTTT 1307119 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 ||||| || ||||| ||||| ||| ||| || || || ||||||||||||||||| | Sbjct 1307120 CGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCTTCCATCTTCTGGCTCAAGAA 1307179 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | || |||||| || || ||| ||||||||||||||| | ||||||||||| Sbjct 1307180 GCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCT 1307239 Query 26013 CCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAGA 26072 |||| || || || |||||||| | | | |||| || | |||| | || | Sbjct 1307240 GCACACCGACTTCGCTTGCCTGCTGTTCTC---CCACCTG----AACAACCGCCCCAGCA 1307292 Query 26073 GACCGTCT-------ACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125 || | | ||| |||| || ||||| || | || ||| ||||||| | Sbjct 1307293 AACAGGTTGTTGAAGACATTATCGTC---GAGGCCGTCGGCATTGAGCAGGAGTTCCTGA 1307349 Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTG 26185 ||||||||||| || || ||| | || ||||| | Sbjct 1307350 CTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCG 1307409 Query 26186 AGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGACTCTACAGTACGC-- 26242 ||| ||| || |||| ||||| ||| | || || | | ||||| |||| Sbjct 1307410 AGTTTGTCGCGGACCGCCTGCTGGTGGC-CCTCGGCAACAAGAAGTACTACA--ACGCCA 1307466 Query 26243 CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAA 26302 | ||||| |||||||| ||||| || ||| ||| || |||||||||||||| || | Sbjct 1307467 CCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGA 1307526 Query 26303 AGAGGGTCGGCGACTATCA 26321 || |||| || ||||| || Sbjct 1307527 AGCGGGTAGGAGACTACCA 1307545 Score = 93.3 bits (102), Expect = 8e-14 Identities = 164/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || |||||||||||| || || |||||| Sbjct 1306648 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAAATCGATCTG 1306707 Query 25537 GCCAAGGACATGGACGGCTGGTA----CGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| || ||| |||| | ||| || | | ||||||| | || || Sbjct 1306708 TCCAAGGATTTGCACGACTGGCACAACCGC-CTGAACGACGACGAGCGCTACTTCATCTC 1306766 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || ||||| ||||| || || |||||||| || |||| | Sbjct 1306767 CCACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCG 1306826 Query 25653 ATTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | || || || || | | ||||| || |||||||| |||||||| Sbjct 1306827 CTTCAGCGGCGAGGTCCAGGTTCCT-GAGGCTCGTTGCTTCTACGGATTCCAGAT 1306880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842210845120