Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq190 93.3 2e-14 >seq190 Length=682122 Score = 93.3 bits (102), Expect = 2e-14 Identities = 177/261 (68%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCT 25980 |||||| || ||| || | ||| ||| |||||| ||||| || | ||| | ||||| Sbjct 233801 CTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGCATAGAACAGATCGCGGGCTCT 233860 Query 25981 CATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 | || || || ||||||||||| || || | ||| || || | ||| |||||||| Sbjct 233861 GACCTCCTCCTTACCGTGATTCTTACGGAGGTCCAGGAACTCGAAGACATCCGAGTGCCA 233920 Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100 || || | ||||| |||||| ||| | || ||||| || || |||||||| Sbjct 233921 GGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCT 233980 Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCT 26160 ||||| | |||||||| | ||| ||||| | ||| | || ||||| |||| Sbjct 233981 GGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCATTGGAGGTACCGTTGGTGCC 234040 Query 26161 ATGAATCTTGGATCCTGTCGA 26181 | ||| | ||||| || || Sbjct 234041 ACCAATGTAAGATCCGGTAGA 234061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039312284725