Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq145 105 8e-18 >seq145 Length=414362 Score = 105 bits (116), Expect = 8e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 ||| || || || || || || || ||||||||||| || || || || || | | || Sbjct 30043 CATGTTGGCAAGGAGGGCCTGGGCCGTGCAGATGTTGCTAGTAGCCTTTTCACGGCGGAT 29984 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417 |||||| || | ||||| || || ||||| | ||| | ||||| || |||| || Sbjct 29983 ATGCTGTTCACGGGTTTGCAGGGCCAATCTCAAGGCACGGTTGCCCAGGCGGTCCTTGGA 29924 Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGC 139477 ||| |||| | ||| || | ||| | ||| |||||||||| || ||||| || Sbjct 29923 AACACCCACAACACGGCCGGGAACCTTACGCTTGTACTTGTCTGCGCAGGCGAAGAAGGC 29864 Query 139478 AGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 || |||||||| ||||||||||| |||| ||| Sbjct 29863 GGCGTGAGGACCACCGTATCCCATGGGAACACC 29831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578996786041960