Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq151 167 3e-35 seq8 122 1e-21 seq158 113 6e-19 seq190 104 3e-16 seq173 89.7 6e-12 >seq151 Length=1390245 Score = 167 bits (184), Expect = 3e-35 Identities = 182/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| ||||||||||| ||| | ||||||||| Sbjct 1307551 GCCTTCTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATC 1307492 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 1307491 GACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 1307432 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| |||||||||||||||||||| ||||| || || ||||||||| | Sbjct 1307431 AGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCATGCCCAGC 1307372 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || ||||| | || ||| ||||| | ||| || |||||||||||||||| Sbjct 1307371 AGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATA 1307312 Query 868931 AT 868932 || Sbjct 1307311 AT 1307310 Score = 114 bits (126), Expect = 2e-19 Identities = 142/192 (74%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| |||| ||| || |||||||| || ||||| Sbjct 1307237 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTT 1307178 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| ||| ||| ||||| ||||| ||||| ||||| || || Sbjct 1307177 CTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAA 1307118 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | ||| |||| || ||| ||||| |||| | | ||||||||| || ||||| Sbjct 1307117 AGCAACGAGACGCTGAGCGAAG--GTCGACTCCCT-GTCCTGGATCCACTTAATGGCCCA 1307061 Query 869359 GTCGGCCTTTTT 869370 |||||||| || Sbjct 1307060 ATCGGCCTTCTT 1307049 Score = 113 bits (124), Expect = 6e-19 Identities = 177/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | |||| | || ||| Sbjct 1306901 GAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCAACGAGCCTCAGGAACCTGG 1306842 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || | ||||||||| || ||||| ||| ||| ||||| Sbjct 1306841 ACCTCGCCGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAG 1306782 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || || ||||| ||| |||| ||||||||||||| | | ||| ||||| | Sbjct 1306781 AACGCGAGAACGTGGGAGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCG 1306722 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 || | || || | |||||||||||||||| || ||||||||||| ||| Sbjct 1306721 TGCAAATCCTTGGACAGATCGATTTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTG 1306662 Query 869870 TACATCTCCCA 869880 ||||||| ||| Sbjct 1306661 TACATCTGCCA 1306651 >seq8 Length=732327 Score = 122 bits (134), Expect = 1e-21 Identities = 122/157 (78%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || ||||| || ||||| || | || || || ||| Sbjct 429641 GACAGCATCGGTGGTACCGTCACCTGCGTTATCCGTAACGTCCCCGTCGGTCTGGGTGAG 429582 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| |||||||||||||||||| ||||| |||||| Sbjct 429581 CCCTGCTTCGACAAGCTCGAGGCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 429522 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 429521 AAGGGCTTCGAGATCGGCTCCGGTTTCGGCGGCTGCG 429485 >seq158 Length=987028 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| |||||||||||||| ||| ||| || || | || ||||| | || || ||| Sbjct 766268 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAAC 766209 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || || ||||||||||||||||| |||||| || ||| Sbjct 766208 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACG 766154 >seq190 Length=682122 Score = 104 bits (114), Expect = 3e-16 Identities = 203/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| ||| || || || |||||||| || || || ||||| Sbjct 233966 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCATTGGA 234025 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||||| | | ||| | |||| | ||| | |||| || | || Sbjct 234026 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACC 234085 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| | ||||||||| | ||||| || | ||||||||||| || || Sbjct 234086 AATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTC 234145 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| |||||||||| ||||| ||||| || | || || || | || || Sbjct 234146 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGCTGAGGCTGGGGAGTACC 234205 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||| || || || | || ||||| ||| | | ||||| || |||||| Sbjct 234206 AGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTGGTAGGT 234265 >seq173 Length=239093 Score = 89.7 bits (98), Expect = 6e-12 Identities = 139/196 (71%), Gaps = 7/196 (4%) Strand=Plus/Plus Query 1726961 GACCCGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTT 1727020 ||| | || | |||||||||| || ||| ||||||||||| || || ||||| ||||| Sbjct 89427 GACTCATCAATGTCGGGGTCGTTGATCAGACCCTTCCACCCCACTGTGGTGCGGGGCTTC 89486 Query 1727021 TCGACATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCG 1727080 |||| ||||| ||||| | || || || ||||| || | ||||||| | || Sbjct 89487 TCGAGGTAGGCACGCATAATGACACAGAGGTCGTCG--GAAAGCTTCTCGGAGA---GCT 89541 Query 1727081 C--GCAGGCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAA 1727138 | ||| || || |||| |||| | | | || |||||||| ||| || ||||| | Sbjct 89542 CCTTCAGACGCTGGGCATATTCGAGGGCCGTGGCAGGGTCGTGGATCGAGCAGGGACCGA 89601 Query 1727139 CGATAACCAGCAGCCG 1727154 | | ||||||||| || Sbjct 89602 CAACAACCAGCAGACG 89617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107120899575691