Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq190 178 1e-39 seq181 114 1e-20 >seq190 Length=682122 Score = 178 bits (196), Expect = 1e-39 Identities = 477/714 (67%), Gaps = 23/714 (3%) Strand=Plus/Plus Query 139306 TACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTT 139364 ||||| |||||||| ||||||| |||| |||||||| | |||| | | | | ||| Sbjct 233709 TACTTCTCGTAGAGGGCGTCGAACTCGT-CACCGTAGACATCAGCCA-AGCCAGGGGCTT 233766 Query 139365 -GTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCG 139423 || || || | || | ||| |||||||||||| || ||| ||||||||||||||| Sbjct 233767 CGTTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCG 233826 Query 139424 GAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCT--TCCGAACCCATGTTACG 139481 || |||||| || | | || |||||| || ||| | || ||| ||| || | | Sbjct 233827 GAGTCCACAGGGCATAGAACAGATCGCGGGC--TCTGACCTCCTCCTTACCG-TGATTC- 233882 Query 139482 TTTC--ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATT 139539 || | | || ||||| || || || || | |||||| || || || |||||||| | Sbjct 233883 TTACGGAGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAA 233942 Query 139540 GCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGC 139596 || || || ||| ||||| || || |||| || ||| || ||||| || || Sbjct 233943 GCACCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGA 234002 Query 139597 AACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCG--AG 139654 | ||| || | ||||| | | || |||||||||| || ||| | | | || || Sbjct 234003 AGCATGGGAACAAGACCATTGGAGGTACCGTTGGTGCCACCAATGTAA--GATCCGGTAG 234060 Query 139655 CTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAAT 139714 |||| | || || || | || || || ||| | ||||| || | | ||||| Sbjct 234061 AGCGGATGCGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAG 234120 Query 139715 CGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATG 139774 || || ||||| ||||| |||||||| |||| ||| ||| || ||||| | Sbjct 234121 TCTTCAAAGTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAG 234180 Query 139775 ACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACA 139834 | | ||| || || | || || || |||||||| || ||||| ||||| Sbjct 234181 AGGCAAGCTGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGT 234240 Query 139835 TTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATAC 139894 | | |||||||| | ||| || |||||||| || | || || || |||||||||| Sbjct 234241 ACTTCTGGGACATCAAGTGGTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATAC 234300 Query 139895 CGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttt 139954 | || | || |||||||||| || ||| || || |||||| || | ||| Sbjct 234301 CAACGGCAACACGCATCAGCAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCA 234360 Query 139955 tCAG--ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||| || |||| ||| ||||||||| |||| ||| | | ||||||||||| Sbjct 234361 ACAGGTATGACCG--CTCCAGGGTCTTGAAGCCGAAGAAGTTGTAGTTGAAATC 234412 >seq181 Length=428174 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | ||||| ||| | || Sbjct 10452 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 10511 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || |||| ||| || ||||| |||||||| ||||| || || || || || Sbjct 10512 GACACAATTGATAACGTTAAGAC-CAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCA 10570 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||||||||||| || || || ||| |||||||| | | | |||| || || || Sbjct 10571 GCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAA 10630 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 ||| || || ||||| || || ||| Sbjct 10631 CATCCAGAAAGAATCCACTCTTCAC 10655 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || ||||| || || || || || || || || | | ||||| | || | Sbjct 10239 AAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCATCGACAAT 10298 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || ||||| || ||||| || || || || || || || || ||| ||||||| Sbjct 10299 GTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTC 10358 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || |||||||||||| | | | |||| || || ||||||||||||||||| Sbjct 10359 GCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAAAGGAATCC 10418 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||| | || | || |||| || || Sbjct 10419 ACCCTTCACCTCGTCCTTCGTCTGCGTGGTGG 10450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/133 (75%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACA 24786 ||||| || || || || ||||| || || ||| ||| || | || |||| || || Sbjct 9947 ACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACGTCAAGACC 10006 Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 || |||||| || || || || || |||||||| || || ||| ||||||| ||||| || Sbjct 10007 AA-GATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGAAA 10065 Query 24847 ACAGCTGGAGGAT 24859 |||||||||||| Sbjct 10066 GCAGCTGGAGGAT 10078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896345910440