Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq151 145 1e-28 seq158 104 4e-16 seq190 87.8 3e-11 >seq151 Length=1390245 Score = 145 bits (160), Expect = 1e-28 Identities = 182/250 (73%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| ||||||||||| ||| | | Sbjct 1307559 TGACACCAGCCTTCTGGTAGTCTCCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCA 1307500 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 |||||||| ||||||| | ||| ||||||| | ||||| ||||| | |||| Sbjct 1307499 GCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGA 1307440 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| ||||| || || |||||||| ||||| || || ||||| Sbjct 1307439 GGGCCACCAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGAGTTCA 1307380 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || || |||||||| | || | | ||||| | ||| || ||||||||| Sbjct 1307379 TGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCT 1307320 Query 794131 CGATGATGAT 794140 ||| ||| || Sbjct 1307319 CGACGATAAT 1307310 Score = 105 bits (116), Expect = 1e-16 Identities = 140/192 (73%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | |||||| ||| ||| || |||||||| || ||||| Sbjct 1307237 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTT 1307178 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| | ||| ||| ||||| ||||| ||||| ||||| || || Sbjct 1307177 CTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAA 1307118 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | ||||| |||| || || ||| | |||| | | ||||||||| || ||||| Sbjct 1307117 AGCAACGAGACGCTGAGCGAA--GGTCGACTCCCT-GTCCTGGATCCACTTAATGGCCCA 1307061 Query 794520 CTCTGCCTTTTT 794531 || ||||| || Sbjct 1307060 ATCGGCCTTCTT 1307049 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| |||||| ||||| ||||| ||||||||||| ||||||||||| || || Sbjct 1306943 GGCTCCTTGATGTAGGTATCGATCAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATC 1306884 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 ||||||||| || || ||||| Sbjct 1306883 ATGATCTGGAATCCGTAGAAGCA 1306861 >seq158 Length=987028 Score = 104 bits (114), Expect = 4e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||| |||||||||||||| ||| || || || | || ||||| ||||| || ||| Sbjct 766268 GCCGCAAACTACCTCGACATTAAGGGTCTTCTGGACGTCGGATGCAAAACCGTTGCGAAC 766209 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| || || || |||||||||||||| |||||| || ||| Sbjct 766208 ATGATCAAGGGCAAGTCTCCGGAAGAGATCCGCAAGACCTTCAACATCCAGAACG 766154 >seq190 Length=682122 Score = 87.8 bits (96), Expect = 3e-11 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || | || |||| ||| || || || |||||||| ||||| || ||||| Sbjct 233966 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCATTGGA 234025 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| | | ||| | || | | ||| | |||| || | || Sbjct 234026 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTTCAGACC 234085 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || ||||| | ||||||||| | ||||| | |||| || |||||||| || || Sbjct 234086 AATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCGTC 234145 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGA 2073755 || ||| |||||||||| | || ||||| || Sbjct 234146 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGA 234181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916222678472897