Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq181 123 2e-23 seq178 96.9 2e-15 seq36 89.7 3e-13 >seq181 Length=428174 Score = 123 bits (136), Expect = 2e-23 Identities = 151/204 (74%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||| |||||||| ||||| || ||| | || |||| Sbjct 10435 AGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCC 10376 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||| ||||||||||| || |||||||| | || | ||||||||||| Sbjct 10375 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 10316 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| ||| | ||| || |||| ||| || Sbjct 10315 TGAATCTTGGTCTTCAC--AT--TGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGAT 10260 Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965 ||||||||| || |||||||| || Sbjct 10259 GGTCTTTCCGGTCAGGGTCTTGAC 10236 Score = 102 bits (112), Expect = 5e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | |||||||||||||| ||||| || || || || | || |||| Sbjct 10891 AGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCATCT 10832 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||| || || |||||||| | || | |||||||| || Sbjct 10831 TCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATC- 10773 Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 || | | || || |||||| | || | || | ||| || || | || || || Sbjct 10772 TTGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGT 10713 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || || ||||| || ||||||||||| Sbjct 10712 CTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 10680 Score = 100 bits (110), Expect = 2e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || |||| |||| ||||| |||||||||||||| Sbjct 10114 CTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAA 10055 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 |||||| || |||||||| | || | |||||||| || | || || |||||| Sbjct 10054 GATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTT 9995 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGA 34955 | || | || ||| |||||| || | ||| |||||||| || |||| Sbjct 9994 GTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGA 9945 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| || ||||| ||||| ||||| || | | | || |||| Sbjct 10663 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCC 10604 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || |||||||||| || |||||||| | || | || |||||||| Sbjct 10603 TCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC- 10545 Query 34886 TTTATTTTTTGT-TTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 || | | || || || ||| | || | || | || || || | || || || Sbjct 10544 TTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGT 10485 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||||||| ||||| || ||||||||||| Sbjct 10484 CTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 10452 >seq178 Length=778842 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| ||| |||| |||| || || ||||| || ||||||| Sbjct 294073 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 294014 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 | || || ||||| || | || | ||||||||||| | || || |||||| Sbjct 294013 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 293954 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || | | |||||| || | ||| |||||||| |||||||||||||| || | Sbjct 293953 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 293894 Query 34968 A 34968 | Sbjct 293893 A 293893 >seq36 Length=863356 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||||||||| ||||| |||||||| || | || | || Sbjct 102580 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 102639 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || ||||||||||| || |||||||| | || | ||||||||||| Sbjct 102640 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTC 102698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691914828037