Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04]
223 sequences; 36,079,011 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq181 93.3 3e-14
>seq181
Length=428174
Score = 93.3 bits (102), Expect = 3e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| |||||| ||||| || |||||||| ||||| | || || | || ||||| ||
Sbjct 10654 TGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGC 10595
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| || || || |||||||||||||| || | || | ||||| ||||| ||| ||
Sbjct 10594 TTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCTTGAATCTT- 10536
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
|| | ||| | || | |||||| ||||| || || | |||||||| || || ||
Sbjct 10535 GGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGT 10476
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| || || || ||||||||||||
Sbjct 10475 GAGAGTCTTGACGAAGATCTGCATA 10451
Score = 93.3 bits (102), Expect = 3e-14
Identities = 155/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| | ||||| || ||||||||||| || || ||||||||||||||||| || ||| |
Sbjct 10895 ACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCC 10836
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
|| ||||| || || || || || || | ||||||||| || | || | || || ||
Sbjct 10835 ATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT 10776
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTG 33711
|| ||| || || | || | || | ||| || | | | ||||| || | |||
Sbjct 10775 ATCTTGAATCTT-AGTCTTGACGTTATCAATGGTATC-CGAGCTCTCCACCTCCAGCGTA 10718
Query 33712 ATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
||||| || || || | || || || ||||||||||||
Sbjct 10717 ATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCATA 10679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703106644160
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |