Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq151 91.5 1e-13 >seq151 Length=1390245 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| || ||| | |||| ||||||||| || ||||||||||| Sbjct 1306825 GCTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCAGCGAAGAACGCGAGAACGTGGG 1306766 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||| | || || | ||||||||| |||| |||||| | || |||||||||| Sbjct 1306765 AGATGAAGTAGCGCTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAAATCCTTGGACA 1306706 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 ||||| || ||| | ||||| | || | | |||||||||||| |||| |||| Sbjct 1306705 GATCGATTTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCC--AGAT 1306648 Query 110892 CT 110893 || Sbjct 1306647 CT 1306646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093159299360