Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq190 138 1e-27 seq151 134 2e-26 seq156 82.4 9e-11 >seq190 Length=682122 Score = 138 bits (152), Expect = 1e-27 Identities = 369/561 (66%), Gaps = 5/561 (1%) Strand=Plus/Plus Query 118938 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 118997 ||||| ||||||||| || ||||| ||||| | | || | | || || || | Sbjct 233709 TACTTCTCGTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCG 233768 Query 118998 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 119057 | |||||||| |||| ||| | || | ||||||| ||||||||||| || || || Sbjct 233769 TTGGGGCAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGA 233828 Query 119058 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 119117 |||| || || |||| ||||| || | | || || | || ||||| ||| Sbjct 233829 GTCCACAGGGCATAGAACAGATCGCGGGCTCTGACCTCCTCCTTACCGTGATTCTTACGG 233888 Query 119118 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 119177 | |||| || || | || ||||| |||||| || || ||||| | || | | || Sbjct 233889 AGGTCCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCG 233948 Query 119178 TTACGACGA---CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATT 119234 ||| ||| |||||| || || || |||||| ||| || || |||||||| Sbjct 233949 GGACGCTTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATG 234008 Query 119235 GGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACA 119294 |||| | ||||| ||| || || || || | ||| ||| | | | || Sbjct 234009 GGAACAAGACCATTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATG 234068 Query 119295 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 119354 ||| | || || ||||||||| || || ||| ||||| ||||| | | | | Sbjct 234069 CGGTGCACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAA 234128 Query 119355 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 119414 || ||||||| || || || ||| |||| | ||| ||||||||| | | Sbjct 234129 GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGC 234188 Query 119415 TGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TG 119473 |||||| ||| |||||||||||||| ||||| || | ||||| |||| ||| | || Sbjct 234189 TGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAA-GTACTTCTG 234247 Query 119474 GGACATCTTGTCGTAGGTCTC 119494 ||||||| || ||||||||| Sbjct 234248 GGACATCAAGTGGTAGGTCTC 234268 Score = 102 bits (112), Expect = 1e-16 Identities = 457/719 (64%), Gaps = 14/719 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| || || ||||| |||||||| ||| |||||||| || || | Sbjct 232904 TAGATGTTGGAGGTATAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 232963 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || ||||||||||| || | || | |||||| |||| ||| | | || || Sbjct 232964 GCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 233023 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361 ||||| || ||||||| || | | | | | |||||| || |||| ||| Sbjct 233024 TTGAGGGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 233083 Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421 ||||| ||||| | || |||||||| | ||||| || | || ||| || | Sbjct 233084 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGA 233143 Query 118422 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGC 118480 ||||| || | | |||||||| || || || || || | |||| || Sbjct 233144 TCGGACGAGGCGGTCAAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 233203 Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540 || ||||||| | || || || | || ||| | || |||| || ||||| | Sbjct 233204 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTT 233262 Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGG 118597 |||||| || |||| || || || | | || |||||| || |||| ||||| Sbjct 233263 GACACCCAGAGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGGG 233319 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 || | || | ||||| | | | || | || | | |||| || || || Sbjct 233320 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTG 233379 Query 118658 AAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714 ||||| | | ||| | | ||||| | ||| ||| | |||||||||| | Sbjct 233380 GAGCTTGCCAAAGTCATACTCGCCGCGAG---CAGCATCGACGAAAGTAGGAAGGGCAAG 233436 Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774 || || || || || |||| ||||||| | || ||||||| || || || ||||| Sbjct 233437 AGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCA 233496 Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 | ||| || || ||||| || | |||||| || || ||| |||| || ||||| Sbjct 233497 GAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 233556 Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA 118893 |||||| |||||| | || | || ||||| || || | || |||||||| | ||||| Sbjct 233557 CTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCAGA 233615 >seq151 Length=1390245 Score = 134 bits (148), Expect = 2e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| |||||||||||||| |||||||| || || |||||| ||||| ||||||||||| Sbjct 1307243 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 1307184 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | | || ||||| ||||||||||| ||||| || Sbjct 1307183 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 1307124 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 130205 ||||| |||| |||||||| ||| |||| || | ||| | | |||||| || | Sbjct 1307123 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 1307065 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 |||| | ||||| || | || || ||||| Sbjct 1307064 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 1307034 >seq156 Length=449549 Score = 82.4 bits (90), Expect = 9e-11 Identities = 165/239 (69%), Gaps = 12/239 (5%) Strand=Plus/Plus Query 14234 TTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGG--TTGATTTTCACGGGCAA 14291 ||||||| || ||||||||||||||||| | || || || | ||||| | || | Sbjct 343614 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCGCG--- 343670 Query 14292 CTT--CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 14349 || | || | ||| || |||| | ||||||||| ||||||||||| ||||| | Sbjct 343671 -TTGGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTC 343729 Query 14350 GG--CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGG 14407 | | | | ||| | || |||||| ||| |||||||| || |||| ||| || Sbjct 343730 CGAACCACTG-ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGT 343787 Query 14408 AGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 | ||||| || || || || || | |||| ||||||||| ||||| ||||||| Sbjct 343788 AACGTCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 343846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433476111880