Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq51 199 1e-45 seq152 143 8e-29 seq181 141 3e-28 seq218 91.5 4e-13 >seq51 Length=432094 Score = 199 bits (220), Expect = 1e-45 Identities = 591/906 (65%), Gaps = 13/906 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || |||||||| || || || || || ||||| | ||| | | |||| | Sbjct 92001 CCGCTGTTGGTATCGATTTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGATGACC 91942 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| || || || || || |||||| | || || || || | ||| || || | Sbjct 91941 GCATTGAAATCATCGCCAACGACCAGGGTAACCGCACTACCCCCTCTTTCGTGGCTTTCA 91882 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || || | || || || | | Sbjct 91881 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCTCACA 91822 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || ||||||||||| || || ||| | ||||| | ||| | || Sbjct 91821 ACACCGTCTTCGATGCTAAGCGTCTGATCGGTCGTCGTTTTGCCGACGCTGAGGTC---- 91766 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || || || | || || | || || | ||||| | | ||| |||| || || || Sbjct 91765 CAGTCCGACATGAAGCACTGGCCCTTCAAGGTTGT-CGAGAAG--GGTGGCAAGCCCATC 91709 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 | |||||||| | || || || || || || ||||| || | || || ||| Sbjct 91708 GTCGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCCGAGGAGGTCTCCTCCATG 91649 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 | | || ||| || | ||||| || || | |||| || || | | ||| Sbjct 91648 ATCCTCACCAAGATGCGTGAGACCGCTGAGGCCTACCTCGGTGGCACCGTCAACAACGCT 91589 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || ||||| || ||||| || || || | |||||| || || || |||||||| Sbjct 91588 GTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGT 91529 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || ||||| | || || || || ||||| ||||| || ||||| Sbjct 91528 CTCATTGCCGGCCTGAACGTTCTCCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCC 91469 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || || | | || || || | || || || ||| | |||||| Sbjct 91468 TACGGTCTGGACAAGAAGGCCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTTGGTGGT 91409 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 ||||| || ||||| || || || || | || ||||| || || || || || || || Sbjct 91408 GGTACCTTCGATGTCTCCCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGGCCACC 91349 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 |||||||| || || | ||||| || || || || || || ||||| || || || Sbjct 91348 GCTGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGCCTCGTCAACCACTTCGTC 91289 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 || || || ||||| ||||| || | || | || || | || | ||||| Sbjct 91288 AACGAGTTCAAGCG-CAAGCACAAGAAGGACCTCACCTCCAACGCTCGTGCTCTCCGTCG 91230 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || | || || || || ||||| |||||| || | || || || |||| ||||| || Sbjct 91229 TCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTCTTCCGCTGCCCAGACCTCCAT 91170 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 ||| || || ||||| || || | || |||| | || || || |||||||| || Sbjct 91169 TGAGATCGACTCTCTCTTCGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTT 91110 Query 350092 TGAAGA 350097 || || Sbjct 91109 CGAGGA 91104 >seq152 Length=361481 Score = 143 bits (158), Expect = 8e-29 Identities = 336/497 (68%), Gaps = 15/497 (3%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || || || || || || || ||||| || || |||||| || || || |||||| Sbjct 299649 GCAGTCATCACCGTGCCCGCTTATTTCAACGACAACCAGCGCCAGGCTACTAAGGATGCT 299590 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || || |||||||| ||||||||| Sbjct 299589 GGTGCCATTGCTGGTCTCAACGTGCTCCGTATCATCAACGAGCCCACTGCAGCAGCAATT 299530 Query 349730 GCATATGGGCTTGATAAA---ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 || ||||| |||| | | ||| | || || ||||||| | ||| | Sbjct 299529 GCTTATGGCCTTGGCTCCGGCAAGTCTGATAAGGAGCGTAACGTTCTTATCTACGATCTT 299470 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 |||||||||||||| ||||| || || || |||| | ||| || | || ||||| Sbjct 299469 GGTGGTGGTACTTTCGATGTGTCTCTCCTTAACA-TCCAAGGTGGTGTCTTCACTGTTAA 299411 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || ||||| || ||||| || ||||||||| |||| ||||||| ||| | || Sbjct 299410 GGCTACTGCCGGAGATACCCACCTTGGTGGACAAGACTTTGATACCAACCTCCTGGACCA 299351 Query 349906 TTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATAT---TGGAGATAATCCTAGAG 349961 || || || || |||| |||| || | || | |||||| | |||| Sbjct 299350 CTTCAAGAAGGAGTTCCAGCG-CAAGACTGGCAAGGACCTCTCTGGAGACG---CGAGAG 299295 Query 349962 CAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCC 350021 | | |||||||| ||||| || || || |||||||||||| | || || |||||| Sbjct 299294 CCCTCCGTCGCCTCAGAACCGCTTGCGAGCGTGCTAAGCGTACTTTGTCCAACGCTACCC 299235 Query 350022 AAACCTCTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACA 350080 | || || | ||||| || ||| ||| | |||||| | || ||| ||| || || || Sbjct 299234 AGACTACTGTGGAAATCGACTCT-TTGTTCGATGGCGAGGACTTCAATTCCTCCATCACC 299176 Query 350081 CGTGCTCGGTTTGAAGA 350097 |||||||| |||||||| Sbjct 299175 CGTGCTCGCTTTGAAGA 299159 >seq181 Length=428174 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| |||||||| || ||||| || || || || || Sbjct 10682 CATACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTC 10623 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || ||||| || | || || ||||| ||||| | ||| ||||| || || Sbjct 10622 GGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGG 10563 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || ||||| || || ||||| || | || || |||||||| | || || | ||| Sbjct 10562 GGGGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTC 10503 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| | ||| | |||||||| || || || || || || |||||||| Sbjct 10502 AACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 10452 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || ||||| || || || |||||||| || || || Sbjct 10454 CATACCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTC 10395 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || |||||||| ||||| ||||| ||||| || || Sbjct 10394 AGACAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGG 10335 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || |||||||| || | || ||||| || || | ||||| | || Sbjct 10334 GGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTC 10275 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || ||||| || | ||||||||||| || || || || Sbjct 10274 CACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 10236 Score = 111 bits (122), Expect = 5e-19 Identities = 151/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || |||||||| ||||||||||| || || || || || || Sbjct 10153 CATACCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 10094 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 | | || || ||||| || || || ||||| || ||||| ||||| ||||| || || Sbjct 10093 ACTAAGCGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGG 10034 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 ||| || || || |||||||| || || | || || || || || | ||| | ||| | Sbjct 10033 AGGGATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATC-GCTGGACT 9975 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || || || || | ||||| ||||| Sbjct 9974 CGACCTCGAGGGTGATGGTCTTGCCGGT 9947 >seq218 Length=863373 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 |||||||||||||||||||| || || || | || || | ||||||||||| ||||| Sbjct 237696 ACACCAGCAAAGTGGAAAGTGTTGAGTGTCATCTGCGTGGCAGGCTCACCAATAGACTGA 237637 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596 || |||| || ||||||||||| ||||| ||| || ||||| Sbjct 237636 GCAGCAAGCACACCAACCATTTCACCAGGGTTGGCACCAGCCT 237594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515250070634069