Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04] 223 sequences; 36,079,011 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq181 181 2e-40 seq178 125 1e-23 seq36 105 1e-17 seq38 89.7 1e-12 >seq181 Length=428174 Score = 181 bits (200), Expect = 2e-40 Identities = 179/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || ||||| || || || | ||| |||||| |||||||||||||| | Sbjct 10679 ACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGA 10620 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || ||||||||||| | || || || || ||||||||||| || ||||| | Sbjct 10619 CAAG-GTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGG 10561 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || || ||||||||||| ||||| | || ||| |||| || ||||| |||| ||| | Sbjct 10560 GGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAA 10501 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | ||||||||||| ||||| | |||||| ||||| |||||||| Sbjct 10500 CTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 10452 Score = 159 bits (176), Expect = 7e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| || || || | ||| ||| ||||| ||||||||||||| Sbjct 10451 ACCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGA 10392 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || || || ||||||| ||| || ||||| || Sbjct 10391 CAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 10332 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||| | || || | ||||| ||||| |||| || || Sbjct 10331 AATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCAC 10272 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092 || || ||||| ||||| || |||| ||||| |||| || Sbjct 10271 CTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGACTA 10231 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || ||||| | || || || ||||||||||||||| Sbjct 10150 ACCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACT 10091 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||||||||||||| || || || ||||| ||||||| ||| || ||||| || Sbjct 10090 AAGCGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGG 10031 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || |||||||| | || ||| | ||||| || || | ||||| Sbjct 10030 GATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGAC 9971 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 9970 CTCGAGGGTGATGGTCTTGCCGGT 9947 Score = 143 bits (158), Expect = 6e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || ||||| || | ||||| || || ||||||||||| || | Sbjct 10906 CCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAG 10847 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || ||||| || | || || || || ||||| | ||| || ||||| ||| Sbjct 10846 AGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGA 10787 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || |||||||| ||||| ||||| | || ||| |||| || || |||| |||| || || Sbjct 10786 ATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTATCCG-AGCTCTCCAC 10728 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||| || || | |||||| ||||| |||||||| Sbjct 10727 CTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 10680 >seq178 Length=778842 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || || || ||||| Sbjct 294071 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 294012 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| || || || || |||||||||||||| |||||||| | || ||| | ||| Sbjct 294011 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 293952 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||| | ||||| ||||| Sbjct 293951 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 293893 >seq36 Length=863356 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||| || | ||| || || |||||||||||||| | Sbjct 102564 ACCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 102623 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || || || ||||||| ||| || ||||| || Sbjct 102624 AAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 102683 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 102684 GATACCCTCCTTGTCT 102699 >seq38 Length=904499 Score = 89.7 bits (98), Expect = 1e-12 Identities = 246/365 (67%), Gaps = 14/365 (4%) Strand=Plus/Plus Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAACAA 274490 || ||||| ||||| |||| ||| ||| | ||||| | |||| |||||| || Sbjct 350673 ACAATGGGGGTGATGAATTCAATCAAGAACTCGGGAATCTTCAGCAAACTGGGAAACTGG 350732 Query 274491 CTATGGAAAAAGTTCATGACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTGTC 274550 || | ||||| |||| || || |||||| | ||||| || ||| ||| Sbjct 350733 GCCTGTAGGAAGTTGATGAGCAGGCCCTTGATGTGACTACCGTCGTGATCCTGATCAGTC 350792 Query 274551 ATGATCATAACATGTCCATACCGAAG--CGAGGAAGTATCTTTATACAACTTCCCTGT-T 274607 |||||||| | || || |||||||| || || || || ||||| ||| | ||| Sbjct 350793 ATGATCATCAAGTGACCGTACCGAAGGCCGCGG--GTGTCGGTATACTCCTT-CTTGTGC 350849 Query 274608 TGAAG-CCCAAGAATTTGCTTGAGAGCGGTGATTTCTTCGTTCTTTGTGATACTCG-CCA 274665 || || |||||||| || ||||| | |||||| | || |||| ||| || | | | Sbjct 350850 TGCAGACCCAAGAAGTT-CTTGATATTCTGGATTTCCTGATTTTTTGAGAT-CTGGTCGA 350907 Query 274666 CAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCGC 274725 ||||| ||||| ||||| |||| ||||| ||||| |||||||| ||| | || Sbjct 350908 AGGAAGCGTCACGGACGTTGAGCAGTTTACCTCGGAGCGGGAAAACACCAAAAAGATCCG 350967 Query 274726 GCCCGATGACCGAAAGACCGGCGATCGCGAGA--GTTGCTGCTGAATCTCCCTCTGTGAG 274783 | || | |||| |||| || || || ||| ||| || || || || |||||||| Sbjct 350968 GGCCAACAACCGCTCGACCAGCCATGGCCAGACCCTTG--GCAGAGTCACCTTCTGTGAG 351025 Query 274784 AATCA 274788 |||| Sbjct 351026 GATCA 351030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736209269842