Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F001931795.1_202017-01-04]
223 sequences; 36,079,011 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq181 181 2e-40
seq178 125 1e-23
seq36 105 1e-17
seq38 89.7 1e-12
>seq181
Length=428174
Score = 181 bits (200), Expect = 2e-40
Identities = 179/229 (78%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
||||||||| || ||||| || || || | ||| |||||| |||||||||||||| |
Sbjct 10679 ACCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGA 10620
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| || ||||||||||| | || || || || ||||||||||| || ||||| |
Sbjct 10619 CAAG-GTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGG 10561
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
| || || ||||||||||| ||||| | || ||| |||| || ||||| |||| ||| |
Sbjct 10560 GGATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAA 10501
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| | ||||||||||| ||||| | |||||| ||||| ||||||||
Sbjct 10500 CTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 10452
Score = 159 bits (176), Expect = 7e-34
Identities = 168/221 (76%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| ||||| || || || | ||| ||| ||||| |||||||||||||
Sbjct 10451 ACCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGA 10392
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || || || ||||||| ||| || ||||| ||
Sbjct 10391 CAGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 10332
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || || | ||||| ||||| |||| || ||
Sbjct 10331 AATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCAC 10272
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092
|| || ||||| ||||| || |||| ||||| |||| ||
Sbjct 10271 CTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGACTA 10231
Score = 147 bits (162), Expect = 5e-30
Identities = 155/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || ||||| | || || || |||||||||||||||
Sbjct 10150 ACCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACT 10091
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|||||||||||||||||| || || || ||||| ||||||| ||| || ||||| ||
Sbjct 10090 AAGCGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGG 10031
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||| || |||||||| | || ||| | ||||| || || | |||||
Sbjct 10030 GATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGAC 9971
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
||||| ||||| ||||| || ||
Sbjct 9970 CTCGAGGGTGATGGTCTTGCCGGT 9947
Score = 143 bits (158), Expect = 6e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || || ||||| || | ||||| || || ||||||||||| || |
Sbjct 10906 CCGCCACGGAGACGGAGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAG 10847
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
||||| || ||||| || | || || || || ||||| | ||| || ||||| |||
Sbjct 10846 AGCGTACGTCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGA 10787
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051
|| |||||||| ||||| ||||| | || ||| |||| || || |||| |||| || ||
Sbjct 10786 ATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTTATCAATGGTATCCG-AGCTCTCCAC 10728
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || |||||||| || || | |||||| ||||| ||||||||
Sbjct 10727 CTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCACGAAGATCTGCAT 10680
>seq178
Length=778842
Score = 125 bits (138), Expect = 1e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || |||||||||||||| || || || || || |||||
Sbjct 294071 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 294012
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || || || || |||||||||||||| |||||||| | || ||| | |||
Sbjct 294011 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 293952
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | ||||| ||||| || || ||||||||||| | ||||| |||||
Sbjct 293951 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 293893
>seq36
Length=863356
Score = 105 bits (116), Expect = 1e-17
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || |||| || | ||| || || |||||||||||||| |
Sbjct 102564 ACCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 102623
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || || || || || ||||||| ||| || ||||| ||
Sbjct 102624 AAGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGG 102683
Query 282992 AATACCCTCCTTGTCT 283007
|||||||||||||||
Sbjct 102684 GATACCCTCCTTGTCT 102699
>seq38
Length=904499
Score = 89.7 bits (98), Expect = 1e-12
Identities = 246/365 (67%), Gaps = 14/365 (4%)
Strand=Plus/Plus
Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAACAA 274490
|| ||||| ||||| |||| ||| ||| | ||||| | |||| |||||| ||
Sbjct 350673 ACAATGGGGGTGATGAATTCAATCAAGAACTCGGGAATCTTCAGCAAACTGGGAAACTGG 350732
Query 274491 CTATGGAAAAAGTTCATGACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTGTC 274550
|| | ||||| |||| || || |||||| | ||||| || ||| |||
Sbjct 350733 GCCTGTAGGAAGTTGATGAGCAGGCCCTTGATGTGACTACCGTCGTGATCCTGATCAGTC 350792
Query 274551 ATGATCATAACATGTCCATACCGAAG--CGAGGAAGTATCTTTATACAACTTCCCTGT-T 274607
|||||||| | || || |||||||| || || || || ||||| ||| | |||
Sbjct 350793 ATGATCATCAAGTGACCGTACCGAAGGCCGCGG--GTGTCGGTATACTCCTT-CTTGTGC 350849
Query 274608 TGAAG-CCCAAGAATTTGCTTGAGAGCGGTGATTTCTTCGTTCTTTGTGATACTCG-CCA 274665
|| || |||||||| || ||||| | |||||| | || |||| ||| || | | |
Sbjct 350850 TGCAGACCCAAGAAGTT-CTTGATATTCTGGATTTCCTGATTTTTTGAGAT-CTGGTCGA 350907
Query 274666 CAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCCATACCTTTCGC 274725
||||| ||||| ||||| |||| ||||| ||||| |||||||| ||| | ||
Sbjct 350908 AGGAAGCGTCACGGACGTTGAGCAGTTTACCTCGGAGCGGGAAAACACCAAAAAGATCCG 350967
Query 274726 GCCCGATGACCGAAAGACCGGCGATCGCGAGA--GTTGCTGCTGAATCTCCCTCTGTGAG 274783
| || | |||| |||| || || || ||| ||| || || || || ||||||||
Sbjct 350968 GGCCAACAACCGCTCGACCAGCCATGGCCAGACCCTTG--GCAGAGTCACCTTCTGTGAG 351025
Query 274784 AATCA 274788
||||
Sbjct 351026 GATCA 351030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046736209269842
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |