Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq20 118 2e-21 >seq20 Length=3442689 Score = 118 bits (130), Expect = 2e-21 Identities = 319/479 (67%), Gaps = 18/479 (4%) Strand=Plus/Plus Query 230180 AGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGC-- 230237 |||||||||| || | | ||||| ||||| | || ||||| || || ||| Sbjct 3346957 AGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGG---TTCCTTCGCTT 3347013 Query 230238 -CATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 |||||| ||||| ||| ||| | |||||||| ||| | || |||||| ||| Sbjct 3347014 CCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCA 3347073 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355 || ||| ||||||||||| || || | | |||| || ||| || | || | Sbjct 3347074 TCTCTCGTGACGAGGGTCTGCA-CACCGACTTCGCTTGCCTGCTGTTCTCCCACCT---G 3347129 Query 230356 AACAAGCTACCATTCGAGACGGTCA---AACAAATCATTACAGAAGCAGTTGAAAACGAA 230412 ||||| | || | | ||| || | ||||| || || || | | || Sbjct 3347130 AACAACCGCCCCAGCAAACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAG 3347189 Query 230413 AAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTAT 230471 |||||||| | ||||||| | || || || || | ||||||||| | | || || Sbjct 3347190 CAGGAGTTCCTGACTGACGCTCTGCCC-GTTGCTCTGCTGGGCATGAACTCCAAGCTGAT 3347248 Query 230472 GGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGT 230531 | | ||||||||||| || || || |||||| | | || || || || || |||| Sbjct 3347249 GTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTA 3347308 Query 230532 GTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAA 230591 |||||| | | |||||||| | || |||||| || ||||| || |||||||| Sbjct 3347309 CTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAA 3347368 Query 230592 CTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG--AAGCCCGAAGA 230648 ||||||||| ||||| || ||||||| |||| | ||||||| ||| ||| |||||| Sbjct 3347369 CTTCTTCGAGAAGCGGGTAGGTGACTACCAGAAGGCTGGTGTCATGGCCAGCACGAAGA 3347427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823688272490