Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq20 132 6e-26 >seq20 Length=3442689 Score = 132 bits (146), Expect = 6e-26 Identities = 194/271 (72%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTG 146057 ||| || || ||||| || |||||| ||||||| ||| || || | |||||||| || Sbjct 1867360 CTGATCGACACCCTGACCAGAGTAATCCGTCTTGGCGTCGACATATTCCGCCCCGAAATG 1867419 Query 146058 CCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGC 146117 ||||||||||| ||||| ||||| || ||||| ||| || | |||| || ||| | Sbjct 1867420 TCTCCACTGGAAGCCGTACACGGGACCGAGGTCGCCGACTTCGCGGTGCGAAAGACCGAC 1867479 Query 146118 CCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAG 146175 | ||||| | || ||||| || ||| | |||||||| |||| || | |||| ||| Sbjct 1867480 TTTGTCGAGGTATTCGCGGGAGCCATTGCCATCCCAGATTTTGATCCCGGCTTCGCTGAG 1867539 Query 146176 AGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTC 146235 | || |||| || | || |||||||||||| || || ||||||| | | | Sbjct 1867540 -GGGCA-GGGAGGAGGTCGTGCCGGAGATGAACCAGAGGAGTTCGGCGAGGACGGCGCGC 1867597 Query 146236 CAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| | ||||||||| || ||||||| Sbjct 1867598 AGGAAGACGCGCTTGGTGGTGAGGAGGGGGA 1867628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076630352920