Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq14 107 2e-18 seq4 104 2e-17 seq5 89.7 4e-13 >seq14 Length=2507526 Score = 107 bits (118), Expect = 2e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 23811 GTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGCGTCGGGCGCGCCGTGTCTCTGGCGGGT 23870 |||||| ||||| |||||||| ||||| || | ||||| || ||||| ||| || | Sbjct 853187 GTTGCCAAGGTCACCGACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAA 853246 Query 23871 GGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTGCAC 23930 |||||| ||||| ||||||||| |||||||||||| || |||| ||||| | ||| || Sbjct 853247 GGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGAC 853306 Query 23931 GTGAAAAcc 23939 ||| || || Sbjct 853307 GTGGAAGCC 853315 >seq4 Length=2618736 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| |||||||||||||| ||||| | |||||| || | ||||||||||| || || Sbjct 1670674 GTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCA 1670733 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||||||| ||| | ||| |||||||| ||||| ||| Sbjct 1670734 GCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTC 1670793 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || ||| | |||| || | ||| |||||||| ||||| | || Sbjct 1670794 ACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTC 1670853 Query 21159 TTGAC 21163 ||||| Sbjct 1670854 TTGAC 1670858 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | ||| | ||| |||||||| || ||||| ||||| Sbjct 1670945 CCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTA 1671004 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| || || || | || || | ||||||||| || Sbjct 1671005 AGCGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGG 1671064 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || |||||| || || | | ||| ||||| | || ||| Sbjct 1671065 ATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGACC 1671124 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| || ||||||||||| Sbjct 1671125 TCGAGGGTGATTGTCTTGCCGGT 1671147 >seq5 Length=3766731 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | |||||||| || | ||||||||||| || ||||| ||||||| Sbjct 1993509 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1993568 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| || || || | || || | |||||||||| ||| Sbjct 1993569 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1993628 Query 21069 ACGCCTTCCTTGTC 21082 | || |||||||| Sbjct 1993629 ATACCCTCCTTGTC 1993642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259081635468