Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq20 197 1e-45 seq6 132 5e-26 seq4 122 9e-23 seq5 98.7 1e-15 seq14 86.0 6e-12 >seq20 Length=3442689 Score = 197 bits (218), Expect = 1e-45 Identities = 215/285 (75%), Gaps = 3/285 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || ||| Sbjct 3346501 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTG 3346560 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | ||||||| | ||| |||||||| |||||||| | |||||| Sbjct 3346561 TCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCTCC 3346620 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || ||||| ||| ||| ||||| ||||||||||| || |||||||| Sbjct 3346621 CACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGAGCGC 3346680 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||||| ||||||| || ||||||||||| || |||||| ||| Sbjct 3346681 TTCAGCGGCGAGGTCCAGGTTCCCGAGGCTCGTTGCTTCTACGGATTCCAGATCATGATG 3346740 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | ||||| || | || || ||| || || || ||| Sbjct 3346741 GAGAACATCCACTCCGAGACCTACTCTCTCCTGATTGATACCTAC 3346785 Score = 188 bits (208), Expect = 7e-43 Identities = 304/437 (70%), Gaps = 0/437 (0%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| | |||||| | ||| ||| | |||||| |||| | Sbjct 3346903 AGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGTC 3346962 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || || ||||| ||||| ||||| ||||||| || || ||||| |||| || | Sbjct 3346963 TCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCT 3347022 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || || |||||||| || || || ||| ||||||||||||||| | | Sbjct 3347023 GGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTG 3347082 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||||||||| |||||| || || |||||||| || || | || || | Sbjct 3347083 ACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCCA 3347142 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | || || ||| || ||| || |||| ||| |||||| ||||| | Sbjct 3347143 GCAAACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGA 3347202 Query 117282 CCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCG 117341 | || || ||||| || ||||||||| | || | | | ||||| || ||||||| Sbjct 3347203 CTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCG 3347262 Query 117342 AGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCA 117401 |||| ||||| ||| | |||||| | | || | | | ||| |||||||| | ||| Sbjct 3347263 AGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGCCACCA 3347322 Query 117402 ACCCGCTGGACTTTATG 117418 |||| | ||||| ||| Sbjct 3347323 ACCCCTTCGACTTCATG 3347339 >seq6 Length=3823878 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || |||||||| || ||||| ||| |||||||||| | | ||||| | | Sbjct 2954663 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 2954722 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| ||||| |||||| |||| ||||| || || Sbjct 2954723 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTCT 2954781 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||||||||| Sbjct 2954782 TATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 2954841 Query 40878 GG 40879 || Sbjct 2954842 GG 2954843 >seq4 Length=2618736 Score = 122 bits (134), Expect = 9e-23 Identities = 152/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| || |||||| |||| ||||| ||| ||| | | | | |||| ||||| Sbjct 1671149 TCACCGGCAAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACG-TCAAG 1671091 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | || || ||||||||||| | |||||||| || || |||| ||| || Sbjct 1671090 ACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGGA 1671031 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || |||||||| || | ||||| || | ||||||||||||||||||||| | || || Sbjct 1671030 AAGCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCTC 1670971 Query 40891 CATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || | ||| || | || || Sbjct 1670970 CATCTTGTCCTCCGCCTGCGTGGTGG 1670945 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || || || | || || || | | Sbjct 1670414 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 1670355 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || |||| || || |||||||| ||| ||||||| Sbjct 1670354 GATACCATTGATAACG-TCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACCA 1670296 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||| |||| || | || || ||| ||| ||||| Sbjct 1670295 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACAA 1670236 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| ||| ||||| || ||| Sbjct 1670235 CATCCAGAAGGAGAGCACTCTGCACCTGGTG 1670205 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || ||||| | || || ||| | || Sbjct 1670642 ATGCAGATCTTCGTCAAGACTCTCACGGGAAAGACGATCACATTGGAAGTTGAATCTTCC 1670583 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| ||||| || ||||||||| ||||||| Sbjct 1670582 GACACAATTGATAACGTT-AAGACCAAGATTCAAGACAAGGAAGGCATCCCCCCGGACCA 1670524 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| || || ||| |||| || | || ||| | ||||||||| Sbjct 1670523 GCAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAA 1670464 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| || |||| || || || || Sbjct 1670463 CATCCAGAAAGAATCCACTCTTCACCTTGT 1670434 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || || || || || ||||||||| | || || || | | |||| | Sbjct 1670863 TAGTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCA 1670804 Query 40757 TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGAC 40816 | | | | ||| || |||| ||||| |||||||| ||| |||||||||| || | Sbjct 1670803 TCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTC 1670744 Query 40817 TCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGA 40876 | |||| ||| || || |||||||| || | || ||||| ||||||||||| || | Sbjct 1670743 TGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCAAA 1670684 Query 40877 AGGAGGCCACGCTGCATCTAGT 40898 |||| |||| || || || || Sbjct 1670683 AGGAATCCACCCTTCACCTCGT 1670662 >seq5 Length=3766731 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| |||||||||| || || |||| ||| || || ||||| || Sbjct 1993642 GACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 1993583 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| || || || ||||||||||||||||||||| |||| || || | ||| | Sbjct 1993582 GACGGCCGTACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACTTGGTGCTC 1993523 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 1993522 CGCCTGCGTGGTGGTGG 1993506 >seq14 Length=2507526 Score = 86.0 bits (94), Expect = 6e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 139382 GGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGAGCAC 139441 ||||||||||| ||| ||||||| ||| | |||||| ||||| || || ||| ||| Sbjct 853315 GGCTTCCACGTCCACCAGTTCGGTGACAACACCAACGGCTGCACCTCCGCTGGCCCTCAC 853256 Query 139442 TTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGA-GATCAGGCACGTCGGCGA 139500 ||||||||| || | |||||| || ||||| | ||| || | | |||||||| || Sbjct 853255 TTCAACCCCTTCGGCAAGACCCACGGTGCTCCCGAGGACGACGAGC-GTCACGTCGGTGA 853197 Query 139501 CCTGGGCAACCTCGAG 139516 ||| |||||| || || Sbjct 853196 CCTTGGCAACTTCAAG 853181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219051874480