Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30]
23 sequences; 35,738,354 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq4 125 9e-24
seq20 107 3e-18
>seq4
Length=2618736
Score = 125 bits (138), Expect = 9e-24
Identities = 470/728 (65%), Gaps = 18/728 (2%)
Strand=Plus/Plus
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
||||||||||| || | |||| |||| ||||| ||| | || || | || | |
Sbjct 314398 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 314457
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 66100
|| || |||| ||| || || ||||| || ||||| ||| |||| || || ||| ||
Sbjct 314458 CAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGC-ATAGAA 314516
Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 66160
| ||| | || ||| ||||| || || ||||| || || |||||| | |
Sbjct 314517 CAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCGAA 314576
Query 66161 AATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220
| ||| | ||||| || || | ||| ||||| | | | || || || ||||| || ||
Sbjct 314577 GACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACC 314636
Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280
||| || | |||||| || ||||| || |||| | | ||| |||| || ||| |||||
Sbjct 314637 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGA 314696
Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGA 66338
||||| ||||| || || || ||| | | || || | | || |||
Sbjct 314697 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTT--CAGA 314754
Query 66339 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 66398
|| || || || || | || ||||| | ||||| || || || || ||||| ||
Sbjct 314755 CCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCG 314814
Query 66399 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---- 66454
|| || || || ||| |||||| | || | ||| ||| | ||| | ||
Sbjct 314815 TCAATGCTGTCCTCCTTCATGTCGACGAGGA---AGCAAGAGGCAAGCTGA-GGCTGGGG 314870
Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514
||| || || || || | || || || ||||| || || | || | || | | |
Sbjct 314871 AGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTG 314930
Query 66515 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 66574
||| ||||| || || || || || | || || || || || |||||||| |
Sbjct 314931 GTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAACGGCAACACGCATCAG 314990
Query 66575 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 66634
|| |||||| || | ||| | | ||| ||| || ||||| ||| || ||||
Sbjct 314991 CAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTATGACCGCTCCAG 315050
Query 66635 AGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 66692
|| || || || || ||||||| ||||| || || ||||| | |||| |||||||
Sbjct 315051 GGTCTTGAAGCCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTA 315108
Query 66693 AGTTTATC 66700
|| | |||
Sbjct 315109 AGCTCATC 315116
>seq20
Length=3442689
Score = 107 bits (118), Expect = 3e-18
Identities = 156/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208
|||| || || ||||| ||| ||| ||||||||||| | | || | ||||||||
Sbjct 3347119 AACAGCAGGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 3347060
Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268
|| ||||| || ||||| || |||||||| || ||||| || ||||| || || || ||
Sbjct 3347059 AAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 3347000
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCT-CTCCATAACCG--GCA 36325
|| ||||| || || || || || || || |||| || | || | | || |
Sbjct 3346999 GAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCC 3346940
Query 36326 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 36363
||||| || |||||||| |||||||||||||||||
Sbjct 3346939 CTGTCCTGGATCCACTTAATGGCCCAATCGGCCTTCTT 3346902
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172610775320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |