Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq20 113 4e-20 seq4 86.0 6e-12 >seq20 Length=3442689 Score = 113 bits (124), Expect = 4e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 |||||||||| |||||| | ||||| | || |||||| | ||||| | || ||||| Sbjct 3347172 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGC 3347231 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||| | | ||||||| |||||||||||||||| |||||| | ||| || || Sbjct 3347232 ATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCC 3347291 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | ||| ||||| || || |||||||| || ||| | || ||| Sbjct 3347292 CTCGGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCG 3347351 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||| || || ||||| ||||||| || || || || ||| Sbjct 3347352 CTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTAC 3347396 >seq4 Length=2618736 Score = 86.0 bits (94), Expect = 6e-12 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||||| || || || ||||||||||| || || | Sbjct 1670644 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 1670703 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | || || ||||| || ||||| |||||||||| ||||| || || || Sbjct 1670704 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 1670763 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| | || || || | | || | ||||| | | |||||| Sbjct 1670764 ATGCCCTCCTTGTCC-TGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCAC 1670822 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATA 139757 ||||| ||| | ||||| ||||||| || || |||| || Sbjct 1670823 CTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGACTA 1670863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063857381600