Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq20 96.9 4e-15 >seq20 Length=3442689 Score = 96.9 bits (106), Expect = 4e-15 Identities = 282/426 (66%), Gaps = 15/426 (4%) Strand=Plus/Plus Query 50437 GTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAA-AACCTTAGG 50495 ||||| ||| | || || |||||| ||| || |||| || | | || || | | | Sbjct 3346980 GTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGT 3347039 Query 50496 CATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACAC 50555 | | ||||| || ||||| || ||||||| | || || || ||||| || ||||||| Sbjct 3347040 C-TCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACAC 3347098 Query 50556 AGACTTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAAT 50615 ||||| || || || | | | | | | |||| || | | ||||| Sbjct 3347099 CGACTTCGCTTGCCTG-----CTGTTCTCCC--ACCTGAACAACCGCCCCAGCAAACAGG 3347151 Query 50616 TT--TG--GACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTT 50671 || || ||||| || || ||||||| ||| || | ||||| | || |||||| Sbjct 3347152 TTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTC 3347211 Query 50672 TACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTG 50731 | ||||| || || ||||||||||| | | ||||||| ||||||| |||||||| | Sbjct 3347212 TGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTTGTCG 3347271 Query 50732 CAGACAGATTGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTT 50790 | ||| | || || || || || |||| ||| ||||| || || |||||||| Sbjct 3347272 CGGACCGCCTGCTGGTGGCCCTCGG-CAACAAGAAGTACTACAACGCCACCAACCCCTTC 3347330 Query 50791 CCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGC 50850 || ||| | || ||| ||| ||| || || ||||| ||||| | || ||||| Sbjct 3347331 GACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGT 3347390 Query 50851 GAATAC 50856 || ||| Sbjct 3347391 GACTAC 3347396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014254233360