Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq20 159 5e-34 >seq20 Length=3442689 Score = 159 bits (176), Expect = 5e-34 Identities = 336/494 (68%), Gaps = 19/494 (4%) Strand=Plus/Plus Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || ||||| | |||| ||| ||||||| | ||| |||| | | ||| | | Sbjct 3346902 AAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCGT 3346961 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 || || || ||||| ||||| ||||| |||||||| || ||| || || ||||||| Sbjct 3346962 CTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTTC 3347021 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 |||||||||||||| || |||||||| || || || | |||||| | || ||||| Sbjct 3347022 TGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTCGT 3347081 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604 |||||||| || ||| ||||| || || ||||| || || || | | | ||| Sbjct 3347082 GACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCACCTGAACAACCGCCCC 3347141 Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664 | ||| | ||| | || | | ||||| | | ||| ||||| | || || | Sbjct 3347142 A--GCAAA--CAG-GTTGTTGAAGACATCATCGT------CGAGGCCGTCGGCATTGAGC 3347190 Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGT 125724 | ||||| || || || | || || || || | |||||||||| |||||| |||| Sbjct 3347191 AGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGT 3347250 Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA--- 125781 | ||||||| |||||||| || || || || ||| | | | ||| ||||| Sbjct 3347251 GTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTG---GTGGCCCTCGGCAACAAGAAGT 3347307 Query 125782 TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCA 125841 |||||||||| || ||||| || |||||| || || || | ||||||||||| Sbjct 3347308 ACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCA 3347367 Query 125842 ACTTTTTCGAGAAG 125855 |||| ||||||||| Sbjct 3347368 ACTTCTTCGAGAAG 3347381 Score = 136 bits (150), Expect = 6e-27 Identities = 209/291 (72%), Gaps = 8/291 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||||| || ||||| | ||| || | |||||| Sbjct 3346501 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTG 3346560 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | || ||| || ||||| | || || || Sbjct 3346561 TCCAAGGATTTGCACGACTGGCACAACCGCCTGAACGACGACGAGCGCTACTTCATCTCC 3346620 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 ||| || | || ||||| || | ||||||||| || |||||||| || | ||| || || Sbjct 3346621 CACGTTCTCGCGTTCTTCGCTGCCTCCGATGGCATTGTCAACGAGAACCTTGTCGA-GCG 3346679 Query 125198 ATTCTCTCAAGAGTTGACCA--TTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254 ||| ||| | ||| |||| |||| ||| ||||| ||||||||||| ||||| Sbjct 3346680 CTTCAGCGGCGAG--GTCCAGGTTCCCGAGG-CTCGTTGCTTCTACGGATTCCAGATCAT 3346736 Query 125255 GATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||| |||||| | ||||| || | |||||| |||||||| | ||||| Sbjct 3346737 GATGGAGAACATCCACTCCGAGACCTACTCTCTCCTGATTGATACCTACAT 3346787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058986945480