Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq20 87.8 2e-12 >seq20 Length=3442689 Score = 87.8 bits (96), Expect = 2e-12 Identities = 232/350 (66%), Gaps = 17/350 (5%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || || || || || || || || ||||| ||| | || || || | Sbjct 3347399 CTGGTAGTCACCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTC 3347340 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | | ||| | || ||| | | | || ||| Sbjct 3347339 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 3347280 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT-GGATTGCGAATTCATGCCCAACATAG 119820 || || || |||||||||||||| | ||||| | ||| || |||||||||| || || Sbjct 3347279 GCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTG-GAGTTCATGCCCAGCAGAG 3347221 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA--ACAT 119878 | || || | ||| | || | ||| |||| |||||| |||| || || || | | | Sbjct 3347220 CAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTCGACGATGATGT 3347161 Query 119879 ACTCAAC-ACCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGTATA 119937 ||||| |||| | ||| | | |||||| | |||| | | | Sbjct 3347160 CTTCAACAACCTGTTTGCTGGGGCGGTTGTTCAGGT-GGGA-----------GAACAGCA 3347113 Query 119938 GACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTG 119987 | ||||| ||||||||||| || || ||||| | || ||||| |||||| Sbjct 3347112 GGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTG 3347063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662262384560