Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq20 89.7 4e-13 >seq20 Length=3442689 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| || ||||| || || || || || || ||||| ||| |||| || || | ||| Sbjct 3347396 GTAGTCACCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCAT 3347337 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 || ||||| || || | || | || || | || ||| || | | || ||| || Sbjct 3347336 GAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCG 3347277 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACAT-AGAATGTGCATTCATGCCCAGCATTGCGA 104770 ||||| ||||| |||||||||| ||||| || || | ||||||||||||| || | Sbjct 3347276 GTCCGCGACAAACTCGATGTACTGACACATCAGCTTG-GAGTTCATGCCCAGCAGAGCAA 3347218 Query 104771 CGGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGATGTCCACGGCTTC 104816 |||| | ||||| ||| | || || | ||| ||| | ||||| || Sbjct 3347217 CGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGACGGCCTC 3347172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935879483565