Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq20 147 2e-30 seq4 114 1e-20 seq5 98.7 9e-16 >seq20 Length=3442689 Score = 147 bits (162), Expect = 2e-30 Identities = 339/504 (67%), Gaps = 15/504 (3%) Strand=Plus/Plus Query 46098 CAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCG 46157 |||||| |||| ||||| || ||||||||| | ||| |||| ||||| |||| Sbjct 3346901 CAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACCTTCGCTCAGCG 3346960 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | | || || || || || ||||| |||| || || || || || ||||||| Sbjct 3346961 TCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTCGCTTCCATCTT 3347020 Query 46218 TTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | |||| || | || | ||||||| || || || || ||||||||| || || | Sbjct 3347021 CTGGCTCAAGAAGCGTGGTC-TCATGCCTGGTCTCACCTTCTCCAACGAGCTCATCTCTC 3347079 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336 | |||||||| ||||| || ||||| || || || || | | | | | || || || Sbjct 3347080 GTGACGAGGGTCTGCACACCGACTTCGCTTGCCTG--CTGTT-CTCCCACCTGAACAACC 3347136 Query 46337 AGCTTGCGCCCG---ACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAA 46391 || || | ||| || ||| ||| || ||||| || | ||||||| | Sbjct 3347137 -----GCCCCAGCAAACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGGCATTGAGCA 3347191 Query 46392 GGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTG 46451 |||||| | || | ||| ||||||| ||| ||||||||||||||| | || ||||| Sbjct 3347192 GGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAAGCTGATGTG 3347251 Query 46452 CGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTT 46511 | |||||||||||||| |||||||| ||||| ||| || | | |||| | | Sbjct 3347252 TCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTA 3347311 Query 46512 TCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTT 46571 |||| ||| || || || || ||| | ||||| |||| ||| || || || || Sbjct 3347312 CAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTT 3347371 Query 46572 TTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| ||||| || || || || Sbjct 3347372 CTTCGAGAAGCGGGTAGGTGACTA 3347395 >seq4 Length=2618736 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | ||| | || |||||||| || |||||||| || || Sbjct 1670945 CCACCACGCAGGCGGAGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTA 1671004 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | |||||||||||| |||||| Sbjct 1671005 AGCGTGCGGCCATCCTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGG 1671064 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | |||||| ||||||||| Sbjct 1671065 ATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGACC 1671124 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | || || ||||| Sbjct 1671125 TCGAGGGTGATTGTCTTGCCGGT 1671147 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||| || ||||||||||||||||| || | Sbjct 1670644 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 1670703 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || ||| |||| | ||||||||||||||| || Sbjct 1670704 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 1670763 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | || | || || | ||||| | Sbjct 1670764 ATGCCCTCCTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACC 1670823 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 || | ||| | ||| || ||||| || || || |||| Sbjct 1670824 TCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGACGA 1670860 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || || || || |||||||| ||| | Sbjct 1670416 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGAC 1670475 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| | |||||| || ||| |||| ||||||||||||||||| ||| Sbjct 1670476 AAGGTACGGCCATCCTCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGG 1670535 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | || |||| || || | Sbjct 1670536 ATGCCTTCCTTGTCTTGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACT 1670595 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || ||||| || ||||| |||||||| Sbjct 1670596 TCCAATGTGATCGTCTTTCCCGTGAGAGTCTTGACGAAGATCTGCAT 1670642 >seq5 Length=3766731 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| || || | ||| |||||||| || |||||||| || Sbjct 1993509 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1993568 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| | ||||||||||||||| ||| Sbjct 1993569 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1993628 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 1993629 ATACCCTCCTTGTC 1993642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012664296320