Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 3e-15 >seq4 Length=2618736 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| |||||||| ||||||||||| | || ||| | | ||||||| || Sbjct 1670668 TGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGC 1670727 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTG 16851 || || || | || || ||||| |||||| || | |||||| ||||| ||| ||| Sbjct 1670728 TTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTG 1670787 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | |||||| | | | | ||||| | |||| || | ||||||||| |||||||| Sbjct 1670788 GT-CTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 1670846 Query 16912 CAGCGTTTTGAC 16923 ||| || ||||| Sbjct 1670847 CAGGGTCTTGAC 1670858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087886448770