Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4 134 2e-26 seq20 107 2e-18 >seq4 Length=2618736 Score = 134 bits (148), Expect = 2e-26 Identities = 472/728 (65%), Gaps = 18/728 (2%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||||||||| || | |||| ||| ||||| ||| | || || | || | | Sbjct 314398 TCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTGGGGCAGAACAGAGTC 314457 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111 || || |||| ||| || || ||||| || ||||| ||| |||| || || ||| || Sbjct 314458 CAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCACAGGGC-ATAGAA 314516 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 ||||| | || ||| ||||| || || ||||| || || |||||| | | Sbjct 314517 CAGATCGCGGGCTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGTCCAGGAACTCGAA 314576 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 | ||| || ||||| || || | ||| ||||| | | | || || || ||||| || || Sbjct 314577 GACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGACGCTTGTTGCCACC 314636 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 ||| || | |||||| || ||||| || |||| | | ||| |||| || ||| ||||| Sbjct 314637 CTGGTCAACGTATCTGGCAGTGTTGTTGAAAACCCGAAGCATGGGAACAAGACCGTTGGA 314696 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 63349 ||||| ||||| || || || ||| | | || || | | || ||| Sbjct 314697 GGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGGTGCACGTT--CAGA 314754 Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409 || || || || || | || ||||| | ||||| || || || || ||||| || Sbjct 314755 CCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAAGTGTCGTAGATACCG 314814 Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT---- 63465 || || || || ||| |||||| | || | ||| ||| | ||| | || Sbjct 314815 TCAATGCTGTCCTCCTTCATGTCGACGAGGA---AGCAAGAGGCAAGCTGA-GGCTGGGG 314870 Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 ||| || || || || | || || || |||||||| || | || | || | | | Sbjct 314871 AGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTACTTCTGGGACATCAAGTG 314930 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585 ||| ||||| || || || || || | || || || || || |||||||| | Sbjct 314931 GTAGGTCTCGATGGCCTTCTCGATGTCACTACCGTGGATACCAACGGCAACACGCATCAG 314990 Query 63586 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63645 || |||||| || | ||| | | ||| ||| || ||||| ||| || |||| Sbjct 314991 CAGGTGCTGGGGACGCTCAGCCACCTTTCCGTTGATCCGCAACAGGTATGACCGCTCCAG 315050 Query 63646 AGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63703 || || || || || ||||||| ||||| || || ||||| | |||| ||||||| Sbjct 315051 GGTCTTGAAGCCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTATACAATAGCCGAGTTA 315108 Query 63704 AGTTTATC 63711 || | ||| Sbjct 315109 AGCTCATC 315116 >seq20 Length=3442689 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || || ||||| ||| ||| ||||||||||| | | || | |||||||| Sbjct 3347119 AACAGCAGGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAG 3347060 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || ||||| || |||||||| || ||||| || ||||| || || || || Sbjct 3347059 AAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCG 3347000 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCT-CTCCATAACCG--GCG 32828 || ||||| || || || || || || || |||| || | || | | || | Sbjct 3346999 GAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCC 3346940 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 32866 ||||| || |||||||| ||||||||||||||||| Sbjct 3346939 CTGTCCTGGATCCACTTAATGGCCCAATCGGCCTTCTT 3346902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631817830800