Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq20 150 4e-31 seq14 123 5e-23 >seq20 Length=3442689 Score = 150 bits (166), Expect = 4e-31 Identities = 310/452 (69%), Gaps = 18/452 (4%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| ||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 3347377 TCGAAGAAGTTGGTCTTACCCGCCAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTG 3347318 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | |||||| || |||||||| | Sbjct 3347317 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCCGCGACAAACTCGATG 3347258 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | ||||||||||| | || | | || | || ||| | | Sbjct 3347257 TACTGACACATCAGCTTGGAGTTCATGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGG 3347198 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC----ACCTG-TGCCAGAG 251797 || |||| || || | || ||||| | | | || |||| ||||| | | | | Sbjct 3347197 AACTCCTGCTCAATGCCGACGGCCTCGACGATGA-TGTCTTCAACAACCTGTTTGCTGGG 3347139 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCG 251856 | | ||||| ||| | ||| |||| | || || || | | ||||||||||||| Sbjct 3347138 GC-GGTTGTT---CAGGTGGGAGAACAGCAGGCAAGCGAAGTCGGT-GTGCAGACCCTCG 3347084 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||||| ||||||||| | || |||||||| | ||||| ||| ||||| Sbjct 3347083 TCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACCACGCTTCTTGAGC 3347024 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACA 251976 |||||||| | ||||| || ||||| | | |||||| || | | ||||| Sbjct 3347023 CAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGCAGCGAAAGCAACG 3346964 Query 251977 AGGCGCTCAGCAAA---CGACT---TGTCCTG 252002 || |||| ||| || ||||| ||||||| Sbjct 3346963 AGACGCTGAGCGAAGGTCGACTCCCTGTCCTG 3346932 >seq14 Length=2507526 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| |||||| || || || |||| ||||||||||| ||| Sbjct 539004 GGTGAGGATCTGTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAAC 538945 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 ||| ||||| | |||||||||| | || || ||||| |||| ||||| || | Sbjct 538944 CAGACCAGCCTCCGCCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGCCCCAACGGTACC 538885 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| ||| || ||||| ||||| |||| ||||| || || || || || Sbjct 538884 GGTAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 538825 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557 |||||| | ||| || || || ||||||||| Sbjct 538824 GATGAGGTCAAGACCGTCTACGTCGAGCACGAC 538792 Score = 95.1 bits (104), Expect = 2e-14 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205 ||||| || || ||| || |||| ||||| || ||||| ||||| ||||| |||||| Sbjct 538203 CAGGTCTCCCTGGGCTCCCGTATTGCCGTCATCGGTCCCAACGGTGCTGGTAAATCTACC 538144 Query 280206 CTAATCAAAGTCCTGACTGGCGAG---ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCAT 280262 || |||| |||||||| || ||| | || |||||| | ||| | |||| Sbjct 538143 CTGGTCAACGTCCTGACCGGTGAGTTGATCCCCACCACTGGTGA---CGTCTACCAGCAC 538087 Query 280263 CCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTG 280322 ||||| || || || ||| || |||||||||||| ||||| || |||||||| Sbjct 538086 GAGAACATCCGTATCGCCTACATCAAGCAGCACGCTTTCGCTCACATTGATAACCACCTC 538027 Query 280323 GACATGACTCCTAACCAATACATTCAGTGGCG 280354 ||| ||||| | | ||||| |||||||| Sbjct 538026 GACTCCACTCCCTCCGAGTACATCCAGTGGCG 537995 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/133 (76%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCC--ATTCTACTGCGTG 279759 || || || ||||||||||||||||||||||| || | || ||| ||| | | | Sbjct 538644 TCCCTCTCCGGTGGTTGGAAGATGAAGCTGGCTCTGGCCCGTGCCGTGTTCGAGTCC--C 538587 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 ||||| |||| ||||| |||||||| ||||||||| ||||| || ||||| |||||| Sbjct 538586 CCGATATCCTGCTGCTCGATGAGCCTACCAACCACTTGGACGTCAAGAACGTCGCCTGGT 538527 Query 279820 TAGTGTCCTACCT 279832 | | | |||||| Sbjct 538526 TGGAGAACTACCT 538514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836497109343