Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq20 239 8e-58 seq4 161 2e-34 >seq20 Length=3442689 Score = 239 bits (264), Expect = 8e-58 Identities = 369/518 (71%), Gaps = 13/518 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 |||||||| |||||||| || ||||| | || |||||| || || | || Sbjct 3346890 CCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAGGACAGGGAGTCGACC 3346949 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 |||| || | || || || || | ||||| ||||| ||||||||||| || ||||| Sbjct 3346950 TTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGTTCCTTC 3347009 Query 42753 GCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 || |||||||||||||||||| || ||| || ||||| || ||||||||||| ||||| Sbjct 3347010 GCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGCCTGGTCTCACCTTCTCCAACGA 3347068 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 |||||| | |||||||| ||||| | ||||| || ||||| |||||||| ||| Sbjct 3347069 GCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTC---CCA 3347125 Query 42872 CCTCAGGCACAA--GCCCTCG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGA 42928 ||| | |||| |||| | || || || | ||||||| |||||||| | Sbjct 3347126 CCT---GAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGG 3347182 Query 42929 GATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGA 42988 || ||| |||||||||| || | | |||||||| | ||| | ||||||||| | | Sbjct 3347183 CATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGCATGAACTCCAA 3347242 Query 42989 CCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCA 43047 || ||||| |||||||| ||| ||||| |||| || || ||| | | || || Sbjct 3347243 GCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGC-CCTCGGCAACA 3347301 Query 43048 GCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCA 43107 ||||||| | | |||||||||||| |||||| |||||| ||| ||| | Sbjct 3347302 AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTA 3347361 Query 43108 AGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||||| ||||||||||| || | ||||||||| Sbjct 3347362 AGACCAACTTCTTCGAGAAGCGGGTAGGTGACTACCAG 3347399 >seq4 Length=2618736 Score = 161 bits (178), Expect = 2e-34 Identities = 727/1143 (64%), Gaps = 37/1143 (3%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| ||| || ||||||| | || | |||||||||||| || ||||| Sbjct 313194 ACGGTGAACTGGATGGGCGCAGAGGCGGCCATCGTGCGCAGGTAGTACATACCCGTCTTC 313253 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || | |||| || | ||||||| || | ||| ||| || ||| Sbjct 313254 AGACCCATCTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTGGGCT----- 313308 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 ||| ||| || |||||||||||| |||||| | ||| | | || || Sbjct 313309 ----CCTT---CAGGTGGATGTTGAGGGACTGAGACTGGTCAATGAACGCACCACGGTCC 313361 Query 243917 GCGGCCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 || ||||| | || |||| ||| || ||||| || |||||||||| | | ||| Sbjct 313362 GCTGCCATCTGCAGGATCGTCCG-CTGGGAGATCTCCCACACCGTCTTGTACAGCGCCTT 313420 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || ||||| ||||||||| || || || | | | |||| || | Sbjct 313421 GATGTCACTGGGGATGTTGGGGATGTTCTGGACGGAACCACCCTCGGCAATGATGCGGTT 313480 Query 244036 GCGCATGTTATCGTTCCACAGGCCCA-AGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCA 244094 |||||| || ||||||||| | | || |||| ||| | ||| ||| | Sbjct 313481 CTTCATGTTGTCCGACCACAGGCCGAGATCGA-CCAGGTCCTTCAGCAGCCAGGGGTTGA 313539 Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154 ||||||| ||||| || | || || ||||| ||||| |||| | || ||||||| Sbjct 313540 CCACCTGGAACTCACCAGCCAAGACACGGCGGGAGTAGATGTTGGAGGTGTAAGGCTCGA 313599 Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCA 244214 || ||| || ||||| ||||| || || ||||| |||||||| | ||||||| Sbjct 313600 AGCACTCGTTGAAGCCCAAGATCTGACTGGTACTGGCAGTGGGCATGGGGGCGACCAGCA 313659 Query 244215 GACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGC 244274 ||||| | || || ||||| ||| ||| || | | || | || | Sbjct 313660 AGCTGTTGCGGACACCAG---TCTGG--GCGA--TCTTGGC-CTTGAGAGCAGCCCAGTC 313711 Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334 || ||||||| | | || || |||||||||| |||| || | |||| | ||| | Sbjct 313712 CC-AGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGGATACCCTGGGAGACAG 313770 Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGA 244394 | |||||||||||| ||| | ||| || ||| || | | || | Sbjct 313771 GAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGATCGGACGAGGCGGTCA 313830 Query 244395 GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGG 244454 | |||| |||||||||||||||||| |||||| | | ||||| | | || Sbjct 313831 AACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGTCTGGCCTCGGCCGAGT 313890 Query 244455 TGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGG 244514 |||||| | || | | ||| | || ||||| || | || || | | |||| Sbjct 313891 CGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTTGACACCCAGCGCAATGG 313950 Query 244515 GTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCA 244574 | | ||| || |||||| | |||| || || |||||||| ||||| |||||| | Sbjct 313951 GACGGTGACGGAAGTTGGACTTCTTGGCCTCCGGGACGGGGTAGTAGTTGATGTCGATGA 314010 Query 244575 CCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACT 244634 |||||| | ||| ||| | | ||||||| ||| ||| |||||| |||| Sbjct 314011 TCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTGGAGCTTGCCAAAGTCATACT 314070 Query 244635 CGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGT 244694 || | || | | ||| | ||| | | ||||| | ||| |||| Sbjct 314071 CGCCGCGAGCAGCATCGACG-----------AAAGTAGGA-AGGGCAAGAGAGGCAAGGT 314118 Query 244695 TGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGC 244754 ||||||| || ||||| |||| |||||| | ||||| ||||||||||| || Sbjct 314119 TGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCAGAGGTTGGAGC 314178 Query 244755 ACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCA 244814 |||||| || |||| || || ||| ||| |||||| || |||||||| |||| Sbjct 314179 TACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCA 314238 Query 244815 TGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCT 244874 ||||||| || |||||| ||| || | || | || |||||| | | ||||| Sbjct 314239 TGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCAGAGCTTCTGAGCCT 314298 Query 244875 TGA 244877 ||| Sbjct 314299 TGA 314301 Score = 159 bits (176), Expect = 7e-34 Identities = 362/533 (68%), Gaps = 16/533 (3%) Strand=Plus/Plus Query 244915 GTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCC-GGGGCA-CGACGCCGGG 244972 ||| ||||| ||||||||| || |||| || | | ||| ||||| || | ||| Sbjct 314388 GTAGAGGGCGTCGAACTCGTCACCGTAGACATCAGCCAAGCCAGGGGCTTCGTTG--GGG 314445 Query 244973 CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAG 245032 || | ||| |||| |||||| ||| || | || |||||| || || || |||| Sbjct 314446 CAGAACAGAGTCCAGTCGCCGTTCGCCTCAACACGCTTCATGAACAGATCCGGAGTCCAC 314505 Query 245033 AGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCT 245090 ||||| | ||| || || | || ||||| ||| ||| || |||||| | || | Sbjct 314506 AGGGCATAGAACAGATCGCGGG--CTCTGACCTCCTCCTTACCGTGGTTCTTACGGAGGT 314563 Query 245091 CCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCC 245150 ||| || || ||||| || |||||||||||| | ||||| || | || ||||| | Sbjct 314564 CCAGGAACTCGAAGACATCCGAGTGCCAGGGCTCAAGGTAGATGGCAAAAGCACCGGGAC 314623 Query 245151 GCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGC 245209 |||||||||| |||||||| || || | || | |||||| | || || | || Sbjct 314624 GCTTGTTGCCACCCTGGTCAACGTATCTGGC-AGTGTTGTTGAAAACCCGAAGCATGGGA 314682 Query 245210 ACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTT---GCCCCTGAGG 245266 || | ||||| ||| ||||||||||| ||||| | || | || || || Sbjct 314683 ACAAGACCGTTGGAGGTACCGTTGGTGCCACCAATGTAAGATCCGGTAGAGCGGATGCGG 314742 Query 245267 TTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATG 245326 ||| | | || || | || |||||| ||||||||| | ||||| |||| | Sbjct 314743 -TGC--ACGTTCAGACCAATACCACCGGCGGTCTTGGAGATCATAGCGCAAGTCTTCAAA 314799 Query 245327 GTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGC 245386 ||||| || || || ||||||||| |||||||| || || ||||| |||| ||| Sbjct 314800 GTGTCGTAGATACCGTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGAGGCAAGC 314859 Query 245387 TGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 || |||| ||| | | | |||||||||||| ||| |||||| || ||||| Sbjct 314860 TGAGGCTGGGGAGTACCAGCGTTGAACAGAGTCGGGGAGGCGTGAGTGAAGTA 314912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338928502480