Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq20 96.9 8e-15 >seq20 Length=3442689 Score = 96.9 bits (106), Expect = 8e-15 Identities = 308/473 (65%), Gaps = 16/473 (3%) Strand=Plus/Plus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348 || ||| |||||||||| || | | |||||| ||||| | || ||||| || | Sbjct 3346950 TTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGG---TTCC 3347006 Query 243349 TGCGC---CATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAAC 243405 | ||| |||||| ||||| ||| ||| | |||||||| ||| | || ||| Sbjct 3347007 TTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCCAAC 3347066 Query 243406 GAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAG 243465 ||| ||||| ||| |||||||| || ||| | |||| | || ||| || | Sbjct 3347067 GAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCCCAC 3347126 Query 243466 CTCCAGAACAAGCTACCATTCGAAACGGTCA---AACAAATCATCACAGAAGCAGTTGAA 243522 || |||||| | || | || ||| || | |||||| || || || | Sbjct 3347127 CT---GAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATCATCGTCGAGGCCGTCGGC 3347183 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCA--TGCCGGCTTATTGGCATGAACTCTG 243580 | || |||| ||| | |||||| | || ||| || | ||||||||||| Sbjct 3347184 ATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCT--CTGCTGGGCATGAACTCCA 3347241 Query 243581 AACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATG 243640 | || ||| | ||||||||||| || || || |||||| | | | || || || | Sbjct 3347242 AGCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCCCTCGGCAACA 3347301 Query 243641 AGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGA 243700 |||| |||||| ||| |||||||| | ||| |||||| || ||||| || | Sbjct 3347302 AGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTCGCTGGCGGGTA 3347361 Query 243701 AAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 | || ||||||||||| ||||| || |||| || || ||||||| ||| Sbjct 3347362 AGACCAACTTCTTCGAGAAGCGGGTAGGTGACTACCAGAAGGCTGGTGTCATG 3347414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879674995050