Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 167 2e-36 >seq4 Length=2618736 Score = 167 bits (184), Expect = 2e-36 Identities = 427/646 (66%), Gaps = 8/646 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||| | |||||| || |||||| ||| ||||| | ||| | || Sbjct 315077 AACTACAACTTCTTCGGCTTCAAGACCCTGGAGCGGTCATACCTGTTGCGGATCAACGGA 315018 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | ||||| || || || ||||||||||| || ||| | || || ||||| Sbjct 315017 AAGGTGGCTGAGCGTCCCCAGCACCTGCTGATGCGTGTTGCCGTTGGTATCCACGGTAGT 314958 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATG--- 93891 ||||| ||| | | | | | | || || | | ||| ||| || Sbjct 314957 GACATCGAGAAGGCCATCGAGACCTACC---ACTTGATGTCCCAGAAGTACTTCACTCAC 314901 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| ||||||| ||||||||||| || || || ||| ||| | | || || ||||| Sbjct 314900 GCCTCCCCGACTCTGTTCAACGCTGGTACTCCCCAGCCTCAGCTTGCCTCTTGCTTCCTC 314841 Query 93952 AT-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 | ||| | |||| ||| ||| ||| || | ||||| | ||| || || | Sbjct 314840 GTCGAC-ATGAAGGAGGACAGCATTGACGGTATCTACGACACTTTGAAGACTTGCGCTAT 314782 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || ||| || || || || | | || ||| | | || | | || || Sbjct 314781 GATCTCCAAGACCGCCGGTGGTATTGGTCTGAACGTGCACCGCATCCGCTCTACCGGATC 314722 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 ||||| | || ||||| || ||||||||||| || || || ||||| ||||| ||||| Sbjct 314721 TTACATTGGTGGCACCAACGGTACCTCCAACGGTCTTGTTCCCATGCTTCGGGTTTTCAA 314662 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || | ||||| ||||||||||| | | | ||| |||| || |||| Sbjct 314661 CAACACTGCCAGATACGTTGACCAGGGTGGCAACAAGCGTCCCGGTGCTTTTGCCATCTA 314602 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 || |||||||||||| |||| || | ||| | ||||| || ||||||||||| || Sbjct 314601 CCTTGAGCCCTGGCACTCGGATGTCTTCGAGTTCCTGGACCTCCGTAAGAACCACGGTAA 314542 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || || ||| | || || ||||| || || ||| || || || || ||||| Sbjct 314541 GGAGGAGGTCAGAGCCCGCGATCTGTTCTATGCCCTGTGGACTCCGGATCTGTTCATGAA 314482 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 || || ||| ||| || ||||| ||| || || ||||| ||| Sbjct 314481 GCGTGTTGAGGCGAACGGCGACTGGACTCTGTTCTGCCCCAACGAA 314436 Score = 134 bits (148), Expect = 1e-26 Identities = 575/895 (64%), Gaps = 28/895 (3%) Strand=Plus/Minus Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAG 94545 ||||| |||| |||| ||| ||| |||||| || |||| ||| ||||||| || Sbjct 314257 GAGACTGGTAACCCCTTCATGCTGTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAG 314198 Query 94546 CACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCG 94605 ||||||| ||| ||||| || || ||||| ||||| | ||||| | | ||||| Sbjct 314197 AACCTCGGAACCATCCGTAGCTCCAACCTCTGCACTGAGATCATTGAGTACAGTGCTCCG 314138 Query 94606 GACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGA-GATGC 94664 || ||| ||||||| || ||||| | ||| | ||| | |||||||| ||| | ||| Sbjct 314137 GATGAGGTTGCTGTCTGCAACCTTGCCTCTCTTGCCCTTCCTACTTTCGT-CGATGCTGC 314079 Query 94665 CTACA-CGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGG 94723 | || || ||| | | | || | ||| | || | || ||| Sbjct 314078 TCGCGGCGAGTATGACTTTGG-CAAGCTCCACGAGGTCGTCCAGGTCT---------TGG 314029 Query 94724 TCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACT 94783 || ||| |||||| | | ||||||| |||| |||||||||||||||||| |||| | Sbjct 314028 TCCGTAACTTGAACAAGATCATCGACATCAACTACTACCCCGTCCCGGAGGCCAAGAAGT 313969 Query 94784 CAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843 | ||| | || || ||||| | | || ||| | ||| | || || || | | Sbjct 313968 CCAACTTCCGTCACCGTCCCATTGCGCTGGGTGTCAACGGTCTGGCTGATGCTTTCCTCG 313909 Query 94844 TGATGCGTCTGCCCTACGACTCTGTCGACGC--GGCGGGTTTGAATTTGAACATATTCGA 94901 | || ||||||| |||||| | ||| || | | | | ||| | | || ||||| Sbjct 313908 CTCTCCGCCTGCCCTTCGACTCGGCCGAGGCCAGACAGCT--GAACATCCAGATCTTCGA 313851 Query 94902 AAGCATTTATTACGGGGCCATGAAACAATCCGTCCACT-TGGCCAGATCGGACGGCGGGC 94960 | ||| ||| ||| | ||| || |||| | | |||| ||| ||| Sbjct 313850 GACCATCTATCACGCTGGTTTGACCGCCTC-GTCCGATCTCGCCAA---GGAGTTCGGAA 313795 Query 94961 CACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020 | |||| | | | ||||| || | ||||| || |||||| |||| | |||| Sbjct 313794 CTTACGAGACCTACGAGGGATCTCCTGTCTCCCAGGGTATCCTTCAGTACGACATGTGGG 313735 Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACAC- 95079 | ||| | | || | ||||||| ||||| || | | | | | || Sbjct 313734 ACCGCACTCCCACTGACCTCTGGGACTGGGCTGCTCTCAAGGCCAA-GATCGCCCAGACT 313676 Query 95080 GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTT 95139 ||||| ||| |||| || |||||||||||||| ||| || |||||| | Sbjct 313675 GGTGTCCGCAACAGCTTGCTGGTCGCCCCCATGCCCACTGCCAGTACCAGTCAGATCTTG 313616 Query 95140 GGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCC 95199 ||| |||||||| ||||| || | |||||||||| | ||| | | || || | || Sbjct 313615 GGCTTCAACGAGTGCTTCGAGCCTTACACCTCCAACATCTACTCCCGCCGTGTCTTGGCT 313556 Query 95200 GGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGT 95257 || || |||| || ||||| || || ||||||| ||| ||| || ||| Sbjct 313555 GGTGAGTTCCAGGTGGTCAACCCCTGGCTGCTGAAGGACCTG--GTCGATCTCGGCCTGT 313498 Query 95258 GGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317 || ||||| | ||||||| | | || || ||||||||||||||||| Sbjct 313497 GGTCGGACAACATGAAGAACCGCATCATTGCCGAGGGTGGTTCCGTCCAGAACATCCCCA 313438 Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 | || || |||||||||||||| |||||||| |||||||||||| | ||||| Sbjct 313437 ACATCCCCAGTGACATCAAGGCGCTGTACAAGACGGTGTGGGAGATCTCCCAGCG 313383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723057767080