Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq20 140 3e-28 seq6 93.3 4e-14 seq14 91.5 1e-13 seq4 89.7 5e-13 seq5 84.2 2e-11 >seq20 Length=3442689 Score = 140 bits (154), Expect = 3e-28 Identities = 347/525 (66%), Gaps = 29/525 (6%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| || ||| ||||| | ||||| || ||||||||| || |||| | Sbjct 3346887 GTCCCCTGCATTGCCAAGAAGGCCGATTGGGCCATTAAGTGGATCCAG---GACAGGGAG 3346943 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || |||| | || || ||||| || ||||| | || || ||||| Sbjct 3346944 TCGACCTTCGCTCAGCGTCTCGTTGCTTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGT 3347003 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 ||| || ||||||| | | || | | || | ||||| || || || ||| | Sbjct 3347004 TCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTCACCTTCTCC 3347063 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556 |||||| | || || || ||||| || |||||||| ||||| || ||||| || | Sbjct 3347064 AACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTCGCTTGCCTGCTGTTCTCC 3347123 Query 52557 TAC---AAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAG 52613 || || | ||| | | || | | | | |||| ||| | Sbjct 3347124 CACCTGAACAACCGCCCCAGCAAACAGGTTGTTGAAGACATCATCGTC------------ 3347171 Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673 ||||| || | || || ||||||| | || | ||| ||||| || | ||||||||| Sbjct 3347172 GAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTTGCTCTGCTGGGC 3347231 Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733 |||||| | || ||||| |||||||||||||||| ||||| || ||| ||||| Sbjct 3347232 ATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGCCTGCTGGTGGCC 3347291 Query 52734 CTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTC 52792 ||| |||| | | ||||||| |||||| ||| || || || || ||| | || || Sbjct 3347292 CTC-GGCAACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCGATCTC 3347350 Query 52793 GCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||| | ||| ||||||||||| ||||||||||| || || || || Sbjct 3347351 GCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGACTA 3347395 >seq6 Length=3823878 Score = 93.3 bits (102), Expect = 4e-14 Identities = 133/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 2954843 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 2954784 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||| || ||||| || ||||| || ||||| || | || || || | ||| Sbjct 2954783 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 2954725 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| || || || || || Sbjct 2954724 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGAC 2954666 Query 138603 AAAA 138606 ||| Sbjct 2954665 GAAA 2954662 >seq14 Length=2507526 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 57300 GGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTC 57359 || || || |||||| | ||| |||||||| ||| || | | | |||||| ||||| Sbjct 853178 GGTCTTGAAGTTGCCAAGGTCACCGACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGT 853237 Query 57360 GCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 57419 ||||| |||||| ||||| ||| || || |||||||||||| || |||| ||||| Sbjct 853238 CTTGCCGAAGGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAA 853297 Query 57420 CTCGTGAACGTGAAATCC 57437 || ||| ||||| || || Sbjct 853298 CTGGTGGACGTGGAAGCC 853315 >seq4 Length=2618736 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || | || | | | || |||||||||||||||||||| | Sbjct 1670644 CCACCACGCAGACGAAGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGAC 1670703 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || || || || | |||| |||||||| |||||||| || Sbjct 1670704 AGGGTACGGCCATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 1670763 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || || || |||| || | |||||| | ||||||| Sbjct 1670764 ATGCCCTCCTTGTC-CTGAATCTTGGTCTTCACATTG-TCGATGGTGTCAGAAGACTCCA 1670821 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| | || | || || || ||||| || || || Sbjct 1670822 CCTCAAGGGTGATGGTCTTTCCGGTCAGGGTCTTGAC 1670858 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || |||||||||||| || ||||| ||||| | || ||||| | Sbjct 1670449 GATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCCAACTGCTTACCAGCG 1670508 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | |||||| |||||||| || || ||||| ||||| ||| | || || |||| Sbjct 1670509 AAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTC-TTGAATCTTGGTCTTAAC 1670567 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||||||| || || || || | || | ||| || || || ||||| || Sbjct 1670568 GTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTCTTTCCCGTGAGAGTCTT 1670627 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 1670628 GACGAAGATCTGCAT 1670642 >seq5 Length=3766731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| || | || || || | | | |||||||| || ||||||||||| Sbjct 1993509 CCACCACGCAGGCGGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1993568 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||||||| || ||||| | |||| |||||||| |||||||| || Sbjct 1993569 AGAGTACGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGG 1993628 Query 138508 ATACCTTCTTTGTC 138521 ||||| || ||||| Sbjct 1993629 ATACCCTCCTTGTC 1993642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262257324560