Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq20 114 1e-20 seq4 113 4e-20 seq6 98.7 9e-16 seq14 89.7 5e-13 >seq20 Length=3442689 Score = 114 bits (126), Expect = 1e-20 Identities = 171/242 (71%), Gaps = 12/242 (5%) Strand=Plus/Plus Query 47343 GACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAA 47402 ||||| | | ||| ||||||| ||||||| |||||| | | || |||||||||| Sbjct 3347160 GACATCATCGTCGAGGCCGTCGGCATTGAGCAGGAGTTCCTGACTGACGCTCTGCCCGTT 3347219 Query 47403 TCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGC 47462 || | |||| |||||| | || ||||| | |||||||||| |||||||| |||||| Sbjct 3347220 GCTCTGCTGGGCATGAACTCCAAGCTGATGTGTCAGTACATCGAGTTTGTCGCGGACCGC 3347279 Query 47463 CTGCTCGT-----TCAGCTA-AAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAG 47516 ||||| || || || | ||| ||| ||| || || || || ||||| Sbjct 3347280 CTGCTGGTGGCCCTCGGCAACAAG------AAGTACTACAACGCCACCAACCCCTTCGAC 3347333 Query 47517 TTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAA 47576 || ||| | || ||||| | ||| ||||||||||| ||||||||||| || || || Sbjct 3347334 TTCATGGAGTCGATCTCGCTGGCGGGTAAGACCAACTTCTTCGAGAAGCGGGTAGGTGAC 3347393 Query 47577 TA 47578 || Sbjct 3347394 TA 3347395 >seq4 Length=2618736 Score = 113 bits (124), Expect = 4e-20 Identities = 131/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || | | |||||| ||| || ||||| ||||| Sbjct 1670975 GTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCCTCCAGCTGCTTTCCG 1671034 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| |||||||| ||||||||||| ||| ||| || |||| Sbjct 1671035 GCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTGGTCTTG 1671094 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| |||| ||| || | |||||| |||| ||| | || |||||||| Sbjct 1671095 ACGTTG-TCGATGGTATCGCTGGACTCGACCTCGAGGGTGATTGTCTTGCCGGT 1671147 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||||||| | ||| || ||| || | ||| || |||||| | Sbjct 1670223 CTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCATCTTCCAACTGCTTACCAGCGAA 1670282 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||| | |||||||| || || || ||||||||||| || || || ||||| | Sbjct 1670283 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCTTGAATCTTAGTCTTGACGTT 1670342 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 || | ||| |||| ||||| || || | || | ||| |||||||| ||||| || || Sbjct 1670343 ATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTCTTGCCGGTAAGAGTCTTCAC 1670402 Query 127102 AAAAATCTGCAT 127113 || |||||||| Sbjct 1670403 GAAGATCTGCAT 1670414 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || |||||||| ||||| || || || || ||| || ||||| |||||| Sbjct 1670674 GTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTTCCA 1670733 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| || || || ||||||||||||||| || || ||| Sbjct 1670734 GCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTC 1670793 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | | ||| || || | ||| | || || |||||||| || Sbjct 1670794 ACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTTCCGGTCAGGGTC 1670853 Query 127097 TTTAC 127101 || || Sbjct 1670854 TTGAC 1670858 >seq6 Length=3823878 Score = 98.7 bits (108), Expect = 9e-16 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| || |||||| |||| Sbjct 2954841 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATA 2954782 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | ||||||||||| || || || |||||||||||| ||| || ||||| |||| || Sbjct 2954781 AGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 2954723 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || || || || || || || Sbjct 2954722 GATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGAA 2954663 Query 127105 A 127105 | Sbjct 2954662 A 2954662 >seq14 Length=2507526 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 50662 GTTGCCCAGATCGCCGACGTGGCGGTCGACGGCGTTGGGAGCGCCGTGGTTGCGGCCCAA 50721 |||||| || || |||||||| || ||| || | | |||||| |||||| | ||| || Sbjct 853187 GTTGCCAAGGTCACCGACGTGACGCTCGTCGTCCTCGGGAGCACCGTGGGTCTTGCCGAA 853246 Query 50722 CGGATTAAAGTGCTCGCCGGCCGACGTGCAGCCGTTGCTCGTGTCGCCGAATTCGTGCAC 50781 || || ||||| ||| || || |||||||||||| | |||| ||||| | ||| || Sbjct 853247 GGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAACTGGTGGAC 853306 Query 50782 GTGGAACCC 50790 |||||| || Sbjct 853307 GTGGAAGCC 853315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500663293520