Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq20 122 1e-22 seq4 98.7 1e-15 seq14 82.4 9e-11 >seq20 Length=3442689 Score = 122 bits (134), Expect = 1e-22 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| |||||||||||||| |||||||| || || |||||| ||||| ||||||||||| Sbjct 3347096 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATGAGACC 3347037 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | | || || || ||||||||||| ||||| || Sbjct 3347036 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGAGAAGAAGATACCCTCAACGGC 3346977 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709 ||||| |||| ||||||| || |||| || | ||| | | |||||| || | Sbjct 3346976 AGCGAAAGCAACGAGACGCTGAGCGAAGG-TCGACTCCCTGTCCTGGATCCACTTAATGG 3346918 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 |||| | ||||| || | || || ||||| Sbjct 3346917 CCCAATCGGCCTTCTTGGCAATGCAGGGGAC 3346887 >seq4 Length=2618736 Score = 98.7 bits (108), Expect = 1e-15 Identities = 455/717 (63%), Gaps = 14/717 (2%) Strand=Plus/Plus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| ||||| ||||| |||||||| ||| |||||||| || || | Sbjct 313575 TAGATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTGACTGGTACTG 313634 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || ||||||||||| || | || | ||||||||||| ||| | || || Sbjct 313635 GCAGTGGGCATGGGGGCGACCAGCAAGCTGTTGCGGACACCAGTCTGGGCGATCTTGGCC 313694 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 ||||| || ||||||| || | | | | |||||||| || |||| ||| Sbjct 313695 TTGAGAGCAGCCCAGTCCCAGAGGTCAGTGGGAGTGCGGTCCCACATGTCGTACTGAAGG 313754 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 ||||| ||||| | || |||||||| | ||||| || | || ||| || | Sbjct 313755 ATACCCTGGGAGACAGGAGATCCCTCGTAGGTCTCGTAAGTTCCGAACTCCTTGGCGAGA 313814 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGC 116201 ||||| || | | |||||||| || ||||| || || | |||| || Sbjct 313815 TCGGACGAGGCGGTCAAACCAGCGTGATAGATGGTCTCGAAGATCTGGATGTTCAGCTGT 313874 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 || ||||||| | || || || | || ||| | || |||| || ||||| | Sbjct 313875 CT-GGCCTCGGCCGAGTCGAAGGGCAGGCGGAGAGCGAGGAAAGCATCAGCCAGACCGTT 313933 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGG 116318 |||||| || |||| || || || | | || ||||| || |||| ||||| Sbjct 313934 GACACCCAGCGCAATGGGACGGTGACGGAAGTTGGACTTCTTGGC---CTCCGGGACGGG 313990 Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378 || | || | ||||| | | | || | || | | |||| || || || Sbjct 313991 GTAGTAGTTGATGTCGATGATCTTGTTCAAGTTACGGACCAAGACCTGGACGACCTCGTG 314050 Query 116379 AAGCTTTTCGTAATCAAAA---CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 116435 ||||| | | ||| | | ||||| | ||| ||| | |||||||||| | Sbjct 314051 GAGCTTGCCAAAGTCATACTCGCCGCGAG---CAGCATCGACGAAAGTAGGAAGGGCAAG 314107 Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495 || || || || || |||| ||||||| | || ||||||| || || || || || Sbjct 314108 AGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCACTGTACTCAATGATCTCAGTGCA 314167 Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555 | || || || ||||| || | |||||| || || ||| |||| || ||||| Sbjct 314168 GAGGTTGGAGCTACGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 314227 Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 |||||| ||||| | || | || ||||| || || | || |||||||| | ||| Sbjct 314228 CTTGTACAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCCAGAATAGCGTACCA 314284 >seq14 Length=2507526 Score = 82.4 bits (90), Expect = 9e-11 Identities = 165/239 (69%), Gaps = 12/239 (5%) Strand=Plus/Plus Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGG--TTGATTTTCACGGGCAA 12930 ||||||| || |||||||| || ||||| | || || || | ||||| | || | Sbjct 1556363 TTACCGATAGCATCAATTTCATCGATGAAGATAATGCAGGGCGTCGATTTCCGCGCG--- 1556419 Query 12931 CTT--CAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATT 12988 || | || | ||| || |||| | ||||||||| ||||||||||| ||||| | Sbjct 1556420 -TTGGCGAACAGATCACGAACTCGGGAAGGACCGACACCGACAAACATCTCGACAAACTC 1556478 Query 12989 GG--CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGG 13046 | | | | ||| | || |||||| ||| ||||||||| || |||| ||| || Sbjct 1556479 CGAACCACTG-ACACT-GAAGAAGGGCACGCCGGATTCACCAGCCGTGGCCTTGGCAAGT 1556536 Query 13047 AGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 | ||||| || || || || |||| |||| ||||||||| ||||| ||||||| Sbjct 1556537 AACGTCTTACCGGTACCCGGAGGACCCGAAAGAATGGCACCACGGGGGATTTTGGCACC 1556595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507023616680