Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq4 147 5e-30 seq6 98.7 2e-15 seq5 93.3 1e-13 >seq4 Length=2618736 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| || || || |||| ||||||||| | ||| || | ||||| Sbjct 1670431 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCC 1670490 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || |||||||| | ||||||||||||||| || ||||| || Sbjct 1670491 TCCAACTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCT 1670550 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | ||||| | | ||| || ||||| ||||||||| Sbjct 1670551 TGAATCTTGGTCTTAACGTTATCAATTGTGTCGGAAGATTCAACTTCCAATGTGATCGTC 1670610 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||||||||| || || || || || Sbjct 1670611 TTTCCCGTGAGAGTCTTGACGAAGATCTG 1670639 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || || |||||||| | ||||||||||| || || | ||||| Sbjct 1670659 AGGACGAGGTGAAGGGTGGATTCCTTTTGAATGTTGTAGTCAGACAGGGTACGGCCATCC 1670718 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||||||||| |||||||| ||||||||||||||||| ||| || || ||| Sbjct 1670719 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 1670778 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| |||| |||||| | | || || || | ||||| ||| Sbjct 1670779 TGAATCTTGGTCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTC 1670838 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || || || || || || Sbjct 1670839 TTTCCGGTCAGGGTCTTGAC 1670858 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| |||||||| |||||||| |||| |||||||||| | || | ||||| Sbjct 1670960 AGGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCACTAAGCGTGCGGCCATCC 1671019 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||||||||||||||| |||||||||||||| ||| || || || ||| Sbjct 1671020 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCC 1671079 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||| || | | || || || | ||||| ||| Sbjct 1671080 TGGATCTTGGTCTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCGAGGGTGATTGTC 1671139 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 1671140 TTGCCGGTGA 1671149 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| ||||| |||||| |||| |||||| || | | || | ||||||| Sbjct 1670203 AGCACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGCGTACGTCCATCT 1670262 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || |||||||||||||||||||||||||| ||| || || || Sbjct 1670263 TCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTATCT 1670322 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | ||| || | | || || |||| ||| |||||| Sbjct 1670323 TGAATCTTAGTCTTGACGTTATCAATGGTATCCGAGCTCTCCACCTCCAGCGTAATCGTC 1670382 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| ||||| || || || Sbjct 1670383 TTGCCGGTAAGAGTCTTCACGAAGATCTG 1670411 Score = 91.5 bits (100), Expect = 3e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||| || ||||||||||| ||||| | || ||| |||| |||||| |||||||| Sbjct 1670513 ATCTTCGCTGGTAAGCAGTTGGAGGATGGCCGTACCTTGTCCGACTACAACATCCAGAAA 1670454 Query 200998 GAGTCTACTCTTCACCTTGT 201017 || || |||||||||||||| Sbjct 1670453 GAATCCACTCTTCACCTTGT 1670434 >seq6 Length=3823878 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| || || | ||||| || |||||||| || ||||||| Sbjct 2954843 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 2954784 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | ||||||||||| ||||| || || || ||||| ||||| ||| ||| | Sbjct 2954783 TAAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 2954724 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | || || |||||||||||||| || || || | Sbjct 2954723 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 2954664 Query 199620 AA 199621 || Sbjct 2954663 AA 2954662 >seq5 Length=3766731 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || |||||||| |||| ||||||||| | | ||| | || || Sbjct 1993524 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 1993583 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| ||||||||||||||||| Sbjct 1993584 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGG 1993624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921252586541