Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20niger_20[genbank_20GCA_5F002211485.1_202017-06-30] 23 sequences; 35,738,354 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq20 172 5e-38 seq6 118 1e-21 seq4 104 2e-17 seq14 84.2 2e-11 >seq20 Length=3442689 Score = 172 bits (190), Expect = 5e-38 Identities = 204/276 (74%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| || || ||| || || | || ||||| | ||||||||| ||| || || Sbjct 3346785 GTAGGTATCAATCAGGAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAA 3346726 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||||| ||||| || |||||| ||||| || || ||| |||||||| || || Sbjct 3346725 TCCGTAGAAGCAACGAGCCTCGGGAACCTGGACCTCGCCGCTGAAGCGCTCGACAAGGTT 3346666 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| ||||| ||| ||| ||||| || || || ||||| |||||| | ||| Sbjct 3346665 CTCGTTGACAATGCCATCGGAGGCAGCGAAGAACGCGAGAACGTGGGAGATGAAGTAGCG 3346606 Query 133347 CTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||||| |||||||| ||| | ||||||| || ||||||||||| || | ||||| Sbjct 3346605 CTCGTCGTCGTTCAGGCGGTTGTGCCAGTCGTGCAAATCCTTGGACAGATCAATTTCCTC 3346546 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| || || |||||||| || |||||||| Sbjct 3346545 GGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 3346510 Score = 163 bits (180), Expect = 3e-35 Identities = 348/515 (68%), Gaps = 10/515 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || || || || || ||| ||||| || || || || || ||| | Sbjct 3347414 CATGACACCAGCCTTCTGGTAGTCACCTACCCGCTTCTCGAAGAAGTTGGTCTTACCCGC 3347355 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 || || || | ||| || || |||||||||| | |||||||| ||| | |||| Sbjct 3347354 CAGCGAGATCGACTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTTGTTGCC 3347295 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || || | || ||||| | ||| || || ||||||||||| || |||| | | | Sbjct 3347294 GA---GGGCCACCAGCAGGCGGTCCGCGACAAACTCGATGTACTGACACATCAGCTTGGA 3347238 Query 132768 ATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGAC 132827 || | ||||||||| || ||||| || || || || || ||||| ||| |||| Sbjct 3347237 GTTCATGCCCAGCAGAGCAACGGGCAGAGCGTCAGTCAGGAACTCCTGCTCAATGCCGAC 3347178 Query 132828 CGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA 132887 || ||| || ||| || ||| | ||| || || | || || ||| Sbjct 3347177 GGCCTCGACGATGATGTCTTCAACAACCTGTTTGCTGGGGCGGTTGTTCAGGTGGGAGAA 3347118 Query 132888 CATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA 132947 || || |||||| |||||| |||| |||||||| | || ||||| |||||| ||| Sbjct 3347117 CAGCAGGCAAGCGAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAA 3347058 Query 132948 AGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGA 133007 || | || |||||||| || || || |||||||| || |||| ||||| || || Sbjct 3347057 GGTGAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAACCGGA 3346998 Query 133008 AAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCT-TCT 133065 ||||||| ||||| ||||| |||||||| || || |||| |||| || | || || Sbjct 3346997 GAAGAAGATACCCTCAACGGCAGCGAAAGCAACGAGACGCTGAGCGAAGGTCGACTCCCT 3346938 Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | ||| |||||| | ||||| |||||||| Sbjct 3346937 GTCCTG--GATCCACTTAATGGCCCAATCGGCCTT 3346905 >seq6 Length=3823878 Score = 118 bits (130), Expect = 1e-21 Identities = 138/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || |||||||| || ||||| ||| ||||||||||| | | ||||| | | Sbjct 2954663 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 2954722 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| || ||| | || || ||||| | Sbjct 2954723 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCGGATCAGCAGCGTC 2954780 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || ||||| || || | |||||||| | ||||||||||||||| | Sbjct 2954781 TTATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 2954840 Query 38431 AGG 38433 ||| Sbjct 2954841 AGG 2954843 >seq4 Length=2618736 Score = 104 bits (114), Expect = 2e-17 Identities = 142/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| || |||||| |||| |||||| ||| ||| | | | | |||| | || Sbjct 1671149 TCACCGGCAAGACAATCACCCTCGAGGTCGAGTCCAGCGATACCATCGACAACG--TCAA 1671092 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| || || ||||| || || ||||||| ||||| || || | ||| || Sbjct 1671091 GACCAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTCGCCGG 1671032 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 || |||||||| || | ||||| || | |||||||||||||| ||||| | || || Sbjct 1671031 AAAGCAGCTGGAGGATGGCCGCACGCTTAGTGACTACAACATCCAGAAGGAGTCTACTCT 1670972 Query 38444 GCATTTGGTGCTGCG 38458 ||| | || || || Sbjct 1670971 CCATCTTGTCCTCCG 1670957 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || || || | || || ||| | | Sbjct 1670414 ATGCAGATCTTCGTGAAGACTCTTACCGGCAAGACGATTACGCTGGAGGTGGAGAGCTCG 1670355 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | |||| || || | || || ||||| |||||| | |||| Sbjct 1670354 GATACCATTGATAACG--TCAAGACTAAGATTCAAGATAAGGAGGGCATTCCCCCGGACC 1670297 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || ||| |||| || | || || ||| ||| |||| Sbjct 1670296 AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGACGTACGCTCTCCGATTACA 1670237 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| ||| || ||||| ||||||| ||| | | ||||| Sbjct 1670236 ACATCCAGAAGGAGAGC-ACTCTGCACCTGGTGCTCCGTCTCCGTGGCGG 1670188 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || || || || || ||||||||| | || || ||| | | |||| | Sbjct 1670863 TAGTCGTCAAGACCCTGACCGGAAAGACCATCACCCTTGAGGTGGAGTCTTCTGACACCA 1670804 Query 38311 TGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368 | | || | | |||| || || | ||||| ||||| |||||| | ||||| ||||| Sbjct 1670803 TCGACAATG--TGAAGACCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCG 1670746 Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428 || || | ||| || || |||||||| || | || ||||| ||||||||||| || Sbjct 1670745 TCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTACAACATTCA 1670686 Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| | || || || | || || ||| || | || || Sbjct 1670685 AAAGGAATCCACCCTTCACCTCGTCCTTCGTCTGCGTGGTGG 1670644 >seq14 Length=2507526 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/138 (76%), Gaps = 6/138 (4%) Strand=Plus/Plus Query 107663 CTTGAGGTTGCCCAGGTCGCCGACGTGCCTGATC-TCGGCGTCGGGCGCGCCGTGG-TCG 107720 ||||| |||||| ||||| |||||||| | | || ||| | ||||| || |||||| || Sbjct 853181 CTTGAAGTTGCCAAGGTCACCGACGTGAC-GCTCGTCGTCCTCGGGAGCACCGTGGGTCT 853239 Query 107721 CGCTTCGTCGGG-TTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAA 107779 || || ||| ||||| || ||| || || |||||||||||| | ||| ||||| Sbjct 853240 TGC--CGAAGGGGTTGAAGTGAGGGCCAGCGGAGGTGCAGCCGTTGGTGTTGTCACCGAA 853297 Query 107780 CTCGTGCACGTGGAAGCC 107797 || ||| ||||||||||| Sbjct 853298 CTGGTGGACGTGGAAGCC 853315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172656200320